RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 PMM2O15305 246 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 MAP3K13O43283 966 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 BRD2P25440 801 aaKnown RBP18.87■□□□□ 0.61
CXCL12-204ENST00000395793 STX17P56962 302 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 SLC8A3P57103 927 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 TRIP4Q15650 581 aaPredicted RBP18.87■□□□□ 0.61
CXCL12-204ENST00000395793 N4BP2L1Q5TBK1 243 aaPredicted RBP18.87■□□□□ 0.61
CXCL12-204ENST00000395793 TMEM270Q6UE05 265 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 LCLAT1Q6UWP7 414 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 FMNL3Q8IVF7 1028 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 CPXM2Q8N436 756 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 DEFB119Q8N690 84 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 KCTD13Q8WZ19 329 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 DDX1Q92499 740 aaKnown RBP18.87■□□□□ 0.61
CXCL12-204ENST00000395793 PIWIL1Q96J94 861 aaKnown RBP18.87■□□□□ 0.61
CXCL12-204ENST00000395793 LRRC4Q9HBW1 653 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 CHD8Q9HCK8 2581 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 STRIP2Q9ULQ0 834 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 EPG5Q9HCE0 2579 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 MAP1BP46821 2468 aaKnown RBP18.86■□□□□ 0.61
CXCL12-204ENST00000395793 PIK3R2O00459 728 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 KCNK5O95279 499 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 SETSIPP0DME0 302 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 ITPKAP23677 461 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 CHKAP35790 457 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 RGS7P49802 495 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 DAOAP59103 153 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 BSPRYQ5W0U4 402 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 FOXR2Q6PJQ5 311 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 TRIM59Q8IWR1 403 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 PPM1KQ8N3J5 372 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 RBBP8NLQ8NC74 664 aaPredicted RBP18.86■□□□□ 0.61
CXCL12-204ENST00000395793 PLD4Q96BZ4 506 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 SFMBT1Q9UHJ3 866 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 EVLQ9UI08 416 aaPredicted RBP18.86■□□□□ 0.61
CXCL12-204ENST00000395793 CYP8B1Q9UNU6 501 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 PCDHB4Q9Y5E5 795 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 STON1Q9Y6Q2 735 aa18.86■□□□□ 0.61
CXCL12-204ENST00000395793 GFRA2O00451 464 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 MSI1O43347 362 aaKnown RBP18.85■□□□□ 0.61
CXCL12-204ENST00000395793 PAEPP09466 180 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 LCP1P13796 627 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 PMLP29590 882 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 PPP1R2P41236 205 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 IL12RB1P42701 662 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 ZNF132P52740 706 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 RPL6Q02878 288 aaKnown RBP18.85■□□□□ 0.61
CXCL12-204ENST00000395793 ENPP2Q13822 863 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 BYSLQ13895 437 aaKnown RBP18.85■□□□□ 0.61
CXCL12-204ENST00000395793 TRIM61Q5EBN2 209 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 PEAR1Q5VY43 1037 aaPredicted RBP18.85■□□□□ 0.61
CXCL12-204ENST00000395793 LYSMD4Q5XG99 296 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 TMEM215Q68D42 235 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 SDE2Q6IQ49 451 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 PMF1Q6P1K2 205 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 RRAGAQ7L523 313 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 SYT12Q8IV01 421 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 SLC41A1Q8IVJ1 513 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 SIX6OS1Q8N1H7 587 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 SLC35F5Q8WV83 523 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 MRGPRX1Q96LB2 322 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 KREMEN1Q96MU8 473 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 PILRBQ9UKJ0 227 aa18.85■□□□□ 0.61
CXCL12-204ENST00000395793 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.85■□□□□ 0.61
CXCL12-204ENST00000395793 GIPC1O14908 333 aa18.84■□□□□ 0.61
CXCL12-204ENST00000395793 HOXD9P28356 352 aaPredicted RBP18.84■□□□□ 0.61
CXCL12-204ENST00000395793 SPDYCQ5MJ68 293 aa18.84■□□□□ 0.61
CXCL12-204ENST00000395793 SCML4Q8N228 414 aa18.84■□□□□ 0.61
CXCL12-204ENST00000395793 CLEC4CQ8WTT0 213 aa18.84■□□□□ 0.61
CXCL12-204ENST00000395793 IPO9Q96P70 1041 aaKnown RBP18.84■□□□□ 0.61
CXCL12-204ENST00000395793 TMEM9BQ9NQ34 198 aa18.84■□□□□ 0.61
CXCL12-204ENST00000395793 FSCN3Q9NQT6 498 aa18.84■□□□□ 0.61
CXCL12-204ENST00000395793 CNGB3Q9NQW8 809 aa18.84■□□□□ 0.61
CXCL12-204ENST00000395793 OLA1Q9NTK5 396 aaKnown RBP18.84■□□□□ 0.61
CXCL12-204ENST00000395793 THAP10Q9P2Z0 257 aaPredicted RBP18.84■□□□□ 0.61
CXCL12-204ENST00000395793 KIAA1257Q9ULG3 409 aa18.84■□□□□ 0.61
CXCL12-204ENST00000395793 HBS1LQ9Y450 684 aaKnown RBP18.84■□□□□ 0.61
CXCL12-204ENST00000395793 M0QYV0 167 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 P4HA2O15460 535 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 TSPAN3O60637 253 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 MARSP56192 900 aaKnown RBP18.83■□□□□ 0.6
CXCL12-204ENST00000395793 KCNH2Q12809 1159 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 CNGA2Q16280 664 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 FUT11Q495W5 492 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 PSAPL1Q6NUJ1 521 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 MSANTD2Q6P1R3 559 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 ANKS1BQ7Z6G8 1248 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 EHBP1Q8NDI1 1231 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 RNF139Q8WU17 664 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 SORCS1Q8WY21 1168 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 ABCC13Q9NSE7 274 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 STOML2Q9UJZ1 356 aa18.83■□□□□ 0.6
CXCL12-204ENST00000395793 KMT2BQ9UMN6 2715 aaPredicted RBP18.82■□□□□ 0.6
CXCL12-204ENST00000395793 CACNA1BQ00975 2339 aa18.82■□□□□ 0.6
CXCL12-204ENST00000395793 BICDL2A1A5D9 508 aa18.82■□□□□ 0.6
CXCL12-204ENST00000395793 AP5Z1O43299 807 aa18.82■□□□□ 0.6
CXCL12-204ENST00000395793 CYBBP04839 570 aa18.82■□□□□ 0.6
CXCL12-204ENST00000395793 PRKCHP24723 683 aa18.82■□□□□ 0.6
CXCL12-204ENST00000395793 SGSHP51688 502 aa18.82■□□□□ 0.6
CXCL12-204ENST00000395793 GCNT1Q02742 428 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms