RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CLEC4EQ9ULY5 219 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 COL5A1P20908 1838 aaPredicted RBP16.65■□□□□ 0.26
SNCA-205ENST00000394991 KALRNO60229 2985 aa16.64■□□□□ 0.25
SNCA-205ENST00000394991 FAM200BP0CF97 657 aa16.64■□□□□ 0.25
SNCA-205ENST00000394991 SNRPFP62306 86 aaKnown RBP16.64■□□□□ 0.25
SNCA-205ENST00000394991 SMAD1Q15797 465 aaKnown RBP16.64■□□□□ 0.25
SNCA-205ENST00000394991 C10orf120Q5SQS8 335 aa16.64■□□□□ 0.25
SNCA-205ENST00000394991 LAYNQ6UX15 382 aa16.64■□□□□ 0.25
SNCA-205ENST00000394991 SNX19Q92543 992 aa16.64■□□□□ 0.25
SNCA-205ENST00000394991 TWNKQ96RR1 684 aa16.64■□□□□ 0.25
SNCA-205ENST00000394991 CFAP46Q8IYW2 2715 aa16.64■□□□□ 0.25
SNCA-205ENST00000394991 KCNK3O14649 394 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 TNFSF14O43557 240 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 SYNCRIPO60506 623 aaKnown RBP16.63■□□□□ 0.25
SNCA-205ENST00000394991 C1QL1O75973 258 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 AFF3P51826 1226 aaKnown RBP16.63■□□□□ 0.25
SNCA-205ENST00000394991 CLDN10P78369 228 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 TMEM215Q68D42 235 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 CNNM4Q6P4Q7 775 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 ANKS1BQ7Z6G8 1248 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 PARD3BQ8TEW8 1205 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 UCMAQ8WVF2 138 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 LRRC27Q9C0I9 530 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 PCED1AQ9H1Q7 454 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 ELOVL2Q9NXB9 296 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 PCDHA5Q9Y5H7 936 aa16.63■□□□□ 0.25
SNCA-205ENST00000394991 EXOC3O60645 756 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 EPHX1P07099 455 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 ACADMP11310 421 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 HLA-EP13747 358 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 CASP1P29466 404 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 CORO1AP31146 461 aaKnown RBP16.62■□□□□ 0.25
SNCA-205ENST00000394991 ACSL1P33121 698 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 ASPAP45381 313 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 SUZ12Q15022 739 aaKnown RBP16.62■□□□□ 0.25
SNCA-205ENST00000394991 CCDC157Q569K6 752 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 KCNT1Q5JUK3 1230 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 SPOPLQ6IQ16 392 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 DHRS13Q6UX07 377 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 UNC93AQ86WB7 457 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 PDCD7Q8N8D1 485 aaKnown RBP16.62■□□□□ 0.25
SNCA-205ENST00000394991 PIP4K2CQ8TBX8 421 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 DHX58Q96C10 678 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 DCBLD2Q96PD2 775 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 UBL7Q96S82 380 aaPredicted RBP16.62■□□□□ 0.25
SNCA-205ENST00000394991 HNRNPABQ99729 332 aaKnown RBP16.62■□□□□ 0.25
SNCA-205ENST00000394991 TM9SF3Q9HD45 589 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 RASAL2Q9UJF2 1139 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 NAGPAQ9UK23 515 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 ANKRD6Q9Y2G4 727 aa16.62■□□□□ 0.25
SNCA-205ENST00000394991 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.62■□□□□ 0.25
SNCA-205ENST00000394991 ZNF462Q96JM2 2506 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 NYNRINQ9P2P1 1898 aaKnown RBP16.61■□□□□ 0.25
SNCA-205ENST00000394991 H0Y8X5 98 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 HMBSP08397 361 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 ITPKBP27987 946 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 GRK6P43250 576 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 ABCG1P45844 678 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 GRIA4P48058 902 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 CCT8P50990 548 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 KIF11P52732 1056 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 AP3M2P53677 418 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 DLG4P78352 724 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 CUL4AQ13619 759 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 EIF4HQ15056 248 aaKnown RBP16.61■□□□□ 0.25
SNCA-205ENST00000394991 UNC13DQ70J99 1090 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 CCDC186Q7Z3E2 898 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 ZNF276Q8N554 614 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 OR2T3Q8NH03 318 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 C7orf25Q9BPX7 421 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 CIPCQ9C0C6 399 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 LHX5Q9H2C1 402 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 CUEDC2Q9H467 287 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 PNPLA8Q9NP80 782 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 OSGEPQ9NPF4 335 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 AGO1Q9UL18 857 aaKnown RBP16.61■□□□□ 0.25
SNCA-205ENST00000394991 ZNF510Q9Y2H8 683 aa16.61■□□□□ 0.25
SNCA-205ENST00000394991 ARID1BQ8NFD5 2236 aaPredicted RBP16.6■□□□□ 0.25
SNCA-205ENST00000394991 PLK4O00444 970 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 PCDHGA12O60330 932 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 C7P10643 843 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 SYT1P21579 422 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 CHKAP35790 457 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 NASPP49321 788 aaPredicted RBP16.6■□□□□ 0.25
SNCA-205ENST00000394991 CLDN6P56747 220 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 IL9RQ01113 521 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 CAMK2GQ13555 558 aaPredicted RBP16.6■□□□□ 0.25
SNCA-205ENST00000394991 ZACNQ401N2 412 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 SERPINA13PQ6UXR4 307 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 IGSF8Q969P0 613 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 BIRC7Q96CA5 298 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 CYFIP2Q96F07 1278 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 SLC39A2Q9NP94 309 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 CGNQ9P2M7 1197 aaKnown RBP16.6■□□□□ 0.25
SNCA-205ENST00000394991 TFIP11Q9UBB9 837 aaKnown RBP16.6■□□□□ 0.25
SNCA-205ENST00000394991 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
SNCA-205ENST00000394991 E9PAM4 449 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 ASS1P00966 412 aaKnown RBP16.59■□□□□ 0.25
SNCA-205ENST00000394991 P4HA1P13674 534 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 PDCP20941 246 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms