RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 KIAA1257Q9ULG3 409 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 RAD54BQ9Y620 910 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 ATG2BQ96BY7 2078 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 GOLGA6L7A0A1B0GV03 622 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 TCRBV21S2A2A0A5A6 115 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 BICDL2A1A5D9 508 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-205ENST00000394892 IGLV3-27P01718 113 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 AFPP02771 609 aaKnown RBP9.26□□□□□ -0.93
ATG4A-205ENST00000394892 SETSIPP0DME0 302 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 LCP1P13796 627 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 PPP1R2P41236 205 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 PTGER3P43115 390 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 NOVA1P51513 510 aaKnown RBP9.26□□□□□ -0.93
ATG4A-205ENST00000394892 PITX1P78337 314 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-205ENST00000394892 COG7P83436 770 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 CREB5Q02930 508 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 ENPP2Q13822 863 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 HSF5Q4G112 596 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-205ENST00000394892 BTBD8Q5XKL5 378 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 NADSYN1Q6IA69 706 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 PSAPL1Q6NUJ1 521 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 MSANTD2Q6P1R3 559 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 TRIML1Q8N9V2 468 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 WFDC5Q8TCV5 224 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 SORCS1Q8WY21 1168 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 LMLNQ96KR4 655 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 GABRG3Q99928 467 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 CLSTN2Q9H4D0 955 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 LRRC4Q9HBW1 653 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 TMEM74BQ9NUR3 256 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 WDR35Q9P2L0 1181 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 HESX1Q9UBX0 185 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 STOML2Q9UJZ1 356 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 LSM7Q9UK45 103 aaKnown RBP9.26□□□□□ -0.93
ATG4A-205ENST00000394892 SLC27A6Q9Y2P4 619 aa9.26□□□□□ -0.93
ATG4A-205ENST00000394892 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.26□□□□□ -0.93
ATG4A-205ENST00000394892 M0QYV0 167 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 PAPSS1O43252 624 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-205ENST00000394892 TSPAN3O60637 253 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 CAVIN2O95810 425 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 PNMA6AP0CW24 399 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-205ENST00000394892 NDUFV2P19404 249 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 HOXD9P28356 352 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-205ENST00000394892 NTSR1P30989 418 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 SLC6A4P31645 630 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 GBP1P32455 592 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 IL12RB1P42701 662 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 DGKGP49619 791 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 YWHAEP62258 255 aaKnown RBP9.25□□□□□ -0.93
ATG4A-205ENST00000394892 TAF5Q15542 800 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 DPCR1Q3MIW9 517 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 USP39Q53GS9 565 aaKnown RBP9.25□□□□□ -0.93
ATG4A-205ENST00000394892 FAM133BQ5BKY9 247 aaKnown RBP9.25□□□□□ -0.93
ATG4A-205ENST00000394892 MIIPQ5JXC2 388 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 EOGTQ5NDL2 527 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 SYPL2Q5VXT5 272 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 TRIM65Q6PJ69 517 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 SCUBE3Q8IX30 993 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 ARHGAP18Q8N392 663 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 CPXM2Q8N436 756 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 KCNV2Q8TDN2 545 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 IPO4Q8TEX9 1081 aaKnown RBP9.25□□□□□ -0.93
ATG4A-205ENST00000394892 HSFY1Q96LI6 401 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 EDEM2Q9BV94 578 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 SLC4A5Q9BY07 1137 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 UBE2TQ9NPD8 197 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-205ENST00000394892 CNGB3Q9NQW8 809 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 LMBRD1Q9NUN5 540 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 CALCOCO1Q9P1Z2 691 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 XPO7Q9UIA9 1087 aaKnown RBP9.25□□□□□ -0.93
ATG4A-205ENST00000394892 KIAA1549LQ6ZVL6 1849 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 MYOFQ9NZM1 2061 aa9.25□□□□□ -0.93
ATG4A-205ENST00000394892 LAMA1P25391 3075 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 MYO16Q9Y6X6 1858 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 IGHV1OR15-9A0A0B4J2B8 117 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 TMEM8BA6NDV4 472 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 CDX4O14627 284 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 KHNYNO15037 678 aaKnown RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 GNA14O95837 355 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 LTFP02788 710 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 HOXB2P14652 356 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 TRIM21P19474 475 aaKnown RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 PON1P27169 355 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 HLA-FP30511 346 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 KCNMA1Q12791 1236 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 EIF4EBP2Q13542 120 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 RFWD3Q6PCD5 774 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 UNQ6494/PRO21346Q6UXR6 183 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 CLEC17AQ6ZS10 378 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 RSRC2Q7L4I2 434 aaKnown RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 KIAA0907Q7Z7F0 614 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 SLC41A1Q8IVJ1 513 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 TMEFF1Q8IYR6 380 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 SIX6OS1Q8N1H7 587 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 DEFB119Q8N690 84 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 DQX1Q8TE96 717 aaKnown RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 ZNF606Q8WXB4 792 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 SHC3Q92529 594 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms