RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SYNE4Q8N205 404 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 ETNPPLQ8TBG4 499 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 TGFBRAP1Q8WUH2 860 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 SLCO2A1Q92959 643 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 SLC35C1Q96A29 364 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 TP53INP1Q96A56 240 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 E2F7Q96AV8 911 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 NANOGQ9H9S0 305 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 KLHL11Q9NVR0 708 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 GMIPQ9P107 970 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 CLUHO75153 1309 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 PLEKHG3A1L390 1219 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 DENND3A2RUS2 1198 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 GOLGA8JA6NMD2 632 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 UBAP1LF5GYI3 381 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 hCG_2039718K7EN88 272 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 M0R2N6 131 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 ENPP3O14638 875 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 GAS7O60861 476 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 KCNJ13O60928 360 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 SCO1O75880 301 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 FAM155BO75949 473 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 KRT18P05783 430 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 EEF1DP29692 281 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 MS4A2Q01362 244 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 GALNT2Q10471 571 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 DGKDQ16760 1214 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 TTC33Q6PID6 262 aaPredicted RBP12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 ANKS1BQ7Z6G8 1248 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 GALNT7Q86SF2 657 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 ANKRD13BQ86YJ7 626 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 CADM2Q8N3J6 435 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 FLAD1Q8NFF5 587 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 LILRB1Q8NHL6 650 aaPredicted RBP12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 MZB1Q8WU39 189 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 MARK4Q96L34 752 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 KLHL32Q96NJ5 620 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 GPR88Q9GZN0 384 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 MAGEE1Q9HCI5 957 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 CD209Q9NNX6 404 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 AVENQ9NQS1 362 aaPredicted RBP12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 AP4S1Q9Y587 144 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 ATRNO75882 1429 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 DIP2CQ9Y2E4 1556 aa12.9□□□□□ -0.35
SLC28A1-203ENST00000394573 A0A087WXM4 84 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 STX16-NPEPL1H3BU86 382 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 HDAC3O15379 428 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 NOL3O60936 208 aaKnown RBP12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 DHRS4L1P0CG22 281 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 MATN1P21941 496 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 S100A5P33763 92 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 PTGS2P35354 604 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 CDK18Q07002 472 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 FAAP100Q0VG06 881 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 BFSP2Q13515 415 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 PTK2BQ14289 1009 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 CAVIN4Q5BKX8 364 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 RSBN1Q5VWQ0 802 aaPredicted RBP12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 LDHAL6AQ6ZMR3 332 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 NAT16Q8N8M0 369 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 CATSPER1Q8NEC5 780 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 PGBD4Q96DM1 585 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 AGPAT1Q99943 283 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 SYT11Q9BT88 431 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 RUBCNLQ9H714 662 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 SLC24A2Q9UI40 661 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 DCXO43602 365 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 CLPXO76031 633 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 IFNB1P01574 187 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 ASNSP08243 561 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 TRIM49P0CI25 452 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 TRIM49CP0CI26 452 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 CCNA2P20248 432 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 TGM1P22735 817 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 GLRA2P23416 452 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 GNL1P36915 607 aaPredicted RBP12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 HSPA13P48723 471 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 ACOT2P49753 483 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 POU6F2P78424 691 aaPredicted RBP12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 GALK2Q01415 458 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 KCNA1Q09470 495 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 C2CD6Q53TS8 623 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 EFHC2Q5JST6 749 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 UGT3A1Q6NUS8 523 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 FRA10AC1Q70Z53 315 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 CHSY1Q86X52 802 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 ABTB2Q8N961 1025 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 BPIFB6Q8NFQ5 453 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 TBCKQ8TEA7 893 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 EMILIN2Q9BXX0 1053 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 MIR1-1HGQ9H1L0 117 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 ADPRHL2Q9NX46 363 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 TMEM260Q9NX78 707 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 POLIQ9UNA4 740 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 SLC8A2Q9UPR5 921 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 POLHQ9Y253 713 aa12.89□□□□□ -0.35
SLC28A1-203ENST00000394573 GOLGA8QA0A0J9YX86 632 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 GOLGA8OA6NCC3 632 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 GOLGA8NF8WBI6 632 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms