RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CDK16Q00536 496 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 INCA1Q0VD86 236 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 MAP2K5Q13163 448 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 CHI3L2Q15782 390 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 MORN1Q5T089 497 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 C4orf50Q6ZRC1 276 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 ZNF410Q86VK4 478 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 ARID3BQ8IVW6 561 aaPredicted RBP13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 DNAJB3Q8WWF6 145 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 FRMD8P1Q9BZ68 369 aaPredicted RBP13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 COX16Q9P0S2 106 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 GNEQ9Y223 722 aaKnown RBP13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 GSC2O15499 205 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 GPR32O75388 356 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 LYPLA1O75608 230 aaPredicted RBP13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 ATP5HO75947 161 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 PDHA1P08559 390 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 TFDP2Q14188 446 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 ACSBG2Q5FVE4 666 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 BSPRYQ5W0U4 402 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 CES3Q6UWW8 571 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 DENND5BQ6ZUT9 1274 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 NRG4Q8WWG1 115 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 SIGLEC10Q96LC7 697 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 LGMNQ99538 433 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 NRDE2Q9H7Z3 1164 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 PPCSQ9HAB8 311 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 MTMR10Q9NXD2 777 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 WFS1O76024 890 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 F2P00734 622 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 VAV1P15498 845 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 SDC4P31431 198 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 TUBP50607 506 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 PKDCCQ504Y2 493 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 TTC39BQ5VTQ0 682 aaPredicted RBP13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 SLC9A4Q6AI14 798 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 KCNT2Q6UVM3 1135 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 OXNAD1Q96HP4 312 aaPredicted RBP13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 EBF4Q9BQW3 602 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 GCOM2Q9BZD3 368 aaPredicted RBP13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 NXF3Q9H4D5 531 aaKnown RBP13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 CYP3A43Q9HB55 503 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 GOLGA2P5Q9HBQ8 144 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 PAK5Q9P286 719 aa13.95□□□□□ -0.18
GTF2F1-201ENST00000394456 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 TRAFD1O14545 582 aaPredicted RBP13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 ENO1P06733 434 aaKnown RBP13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 MYL3P08590 195 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 ZNF865P0CJ78 1059 aaPredicted RBP13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 AKAP5P24588 427 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 ATICP31939 592 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 L1CAMP32004 1257 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 GRM5P41594 1212 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 RBP5P82980 135 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 TMPRSS15P98073 1019 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 SLC6A3Q01959 620 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 MFSD10Q14728 455 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 TMEM40Q8WWA1 233 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 NAF1Q96HR8 494 aaKnown RBP13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 KCTD15Q96SI1 283 aaPredicted RBP13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 BTBD10Q9BSF8 475 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 TLE6Q9H808 572 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 KLK14Q9P0G3 267 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 ITGA11Q9UKX5 1188 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 PLLPQ9Y342 182 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 C2CD2Q9Y426 696 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 MYO18AQ92614 2054 aaKnown RBP13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 WDR27A2RRH5 827 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 RRN3P2A6NIE6 340 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 GYG2O15488 501 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 TREHO43280 583 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 MAP3K13O43283 966 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 GOT1P17174 413 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 RCN2Q14257 317 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 RCN1Q15293 331 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 FAM47CQ5HY64 1035 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 SESTD1Q86VW0 696 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 CHSY1Q86X52 802 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 RASAL3Q86YV0 1011 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 ADGRF2Q8IZF7 708 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 NDUFAF2Q8N183 169 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 MAB21L3Q8N8X9 362 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 OR6B3Q8NGW1 331 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 SLC35F5Q8WV83 523 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 ALKBH8Q96BT7 664 aaKnown RBP13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 NSL1Q96IY1 281 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 PHACTR1Q9C0D0 580 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 VRTNQ9H8Y1 702 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 CACNG4Q9UBN1 327 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 HESX1Q9UBX0 185 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 LNPEPQ9UIQ6 1025 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 PSAT1Q9Y617 370 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 ZNF236Q9UL36 1845 aa13.94□□□□□ -0.18
GTF2F1-201ENST00000394456 NRCAMQ92823 1304 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 APOEP02649 317 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 SNRPAP09012 282 aaKnown RBP13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 P4HA1P13674 534 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 ACAP1Q15027 740 aa13.93□□□□□ -0.18
GTF2F1-201ENST00000394456 SLC27A1Q6PCB7 646 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms