RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 DNAJC3Q13217 504 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 OLIG2Q13516 323 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 PPP2R5DQ14738 602 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 FAM133BQ5BKY9 247 aaKnown RBP11.53□□□□□ -0.56
TCOF1-203ENST00000394269 RNF180Q86T96 592 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 TADA2BQ86TJ2 420 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 ANKS4BQ8N8V4 417 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 CCDC197Q8NCU1 140 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 RNF139Q8WU17 664 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 CELF6Q96J87 481 aaKnown RBP11.53□□□□□ -0.56
TCOF1-203ENST00000394269 B3GALT6Q96L58 329 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 WDR83Q9BRX9 315 aaKnown RBP11.53□□□□□ -0.56
TCOF1-203ENST00000394269 ZNF670Q9BS34 389 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 FOXP3Q9BZS1 431 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 RABGEF1Q9UJ41 708 aa11.53□□□□□ -0.56
TCOF1-203ENST00000394269 CCDC78A2IDD5 438 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 DPYSL4O14531 572 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 MFSD11O43934 449 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 USP12O75317 370 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 INHBAP08476 426 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 TGM2P21980 687 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 GCAP28676 217 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 NOS2P35228 1153 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 UPP1Q16831 310 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 HHATQ5VTY9 493 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 OVOS1Q6IE37 1185 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 PID1Q7Z2X4 250 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 ZNF280BQ86YH2 543 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
TCOF1-203ENST00000394269 TMLHEQ9NVH6 421 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 ABI2Q9NYB9 513 aaPredicted RBP11.52□□□□□ -0.57
TCOF1-203ENST00000394269 IL1RAPL1Q9NZN1 696 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 VCANP13611 3396 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 FAM47DPA6NHR8 397 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 CPP00450 1065 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 AMHP03971 560 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 PCSK1P29120 753 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 TM4SF4P48230 202 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 DPYSL2Q16555 572 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 CES3Q6UWW8 571 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 PRPF39Q86UA1 669 aaKnown RBP11.52□□□□□ -0.57
TCOF1-203ENST00000394269 LRRTM3Q86VH5 581 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 ZMIZ2Q8NF64 920 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 TFB1MQ8WVM0 346 aaKnown RBP11.52□□□□□ -0.57
TCOF1-203ENST00000394269 TEKT4Q8WW24 435 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 ARHGEF4Q9NR80 690 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 UBP1Q9NZI7 540 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 PSMC3IPQ9P2W1 217 aaPredicted RBP11.52□□□□□ -0.57
TCOF1-203ENST00000394269 GIT1Q9Y2X7 761 aa11.52□□□□□ -0.57
TCOF1-203ENST00000394269 TCRBV9S1A1TA0A576 114 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 ODC1P11926 461 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 ACLYP53396 1101 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 CORO7P57737 925 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 TRABD2AQ86V40 505 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 CDKL3Q8IVW4 592 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-203ENST00000394269 MPP5Q8N3R9 675 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 MAML1Q92585 1016 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 ZNF317Q96PQ6 595 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-203ENST00000394269 FRMD8P1Q9BZ68 369 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-203ENST00000394269 SLC13A1Q9BZW2 595 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 PRDM12Q9H4Q4 367 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 WDCPQ9H6R7 721 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 A0A0U1RQF3 1178 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 GABRDO14764 452 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 LTFP02788 710 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 MT-ND3P03897 115 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 EPHB2P29323 1055 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 PBX3P40426 434 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 IRX4P78413 519 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 BMPR2Q13873 1038 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 NCBP2-AS2Q69YL0 99 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 SLC9A4Q6AI14 798 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 UNC5BQ8IZJ1 945 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 USP33Q8TEY7 942 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 HTR3CQ8WXA8 447 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 APOL2Q9BQE5 337 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 RASSF4Q9H2L5 321 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 SLCO1B3Q9NPD5 702 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 ANLNQ9NQW6 1124 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 CHST12Q9NRB3 414 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 FZD10Q9ULW2 581 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 TOMM70O94826 608 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 F7P08709 466 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-203ENST00000394269 TPI1P60174 286 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 IL9RQ01113 521 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 SLC45A4Q5BKX6 768 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 KDELC2Q7Z4H8 507 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 COLGALT1Q8NBJ5 622 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 PCSK9Q8NBP7 692 aaKnown RBP11.51□□□□□ -0.57
TCOF1-203ENST00000394269 FAM193BQ96PV7 902 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-203ENST00000394269 CYTH2Q99418 400 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 PITPNM3Q9BZ71 974 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 TKTL2Q9H0I9 626 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 KLHL8Q9P2G9 620 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-203ENST00000394269 SFMBT1Q9UHJ3 866 aa11.51□□□□□ -0.57
TCOF1-203ENST00000394269 E2F8A0AVK6 867 aa11.5□□□□□ -0.57
TCOF1-203ENST00000394269 H3BRJ5 948 aa11.5□□□□□ -0.57
TCOF1-203ENST00000394269 UGT1A9O60656 530 aa11.5□□□□□ -0.57
TCOF1-203ENST00000394269 FYNP06241 537 aa11.5□□□□□ -0.57
TCOF1-203ENST00000394269 ERCC2P18074 760 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms