RNA–Protein interactions for RNA: ENST00000394011.7

RALGPS1-206, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

TSL 1 (best) BASIC

Gene RALGPS1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-206ENST00000394011 NEDD8-MDP1E9PL57 170 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 GABRG2P18507 467 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 CDK11BP21127 795 aaKnown RBP20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 KRT31Q15323 416 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 N4BP2L1Q5TBK1 243 aaPredicted RBP20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 RNF43Q68DV7 783 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 GRAMD4Q6IC98 578 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 BHLHA9Q7RTU4 235 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 AOPEPQ8N6M6 819 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 ANKRD20A12PQ8NF67 263 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 HMGB4Q8WW32 186 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 BBS2Q9BXC9 721 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 UBXN6Q9BZV1 441 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 NAGPAQ9UK23 515 aa20.53■□□□□ 0.88
RALGPS1-206ENST00000394011 SYCE3A1L190 88 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 O00370 1275 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 CDX4O14627 284 aaPredicted RBP20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 PMLP29590 882 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 USP8P40818 1118 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 PTGER3P43115 390 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 PSEN1P49768 467 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 BCAT1P54687 386 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 SKOR2Q2VWA4 1001 aaPredicted RBP20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 PREPLQ4J6C6 727 aaPredicted RBP20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 C10orf120Q5SQS8 335 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 PIGZQ86VD9 579 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 UBA3Q8TBC4 463 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 TFAP2BQ92481 460 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 TMEM74BQ9NUR3 256 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 WDR35Q9P2L0 1181 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 LSM7Q9UK45 103 aaKnown RBP20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 CNTN6Q9UQ52 1028 aa20.52■□□□□ 0.88
RALGPS1-206ENST00000394011 PI4KAP42356 2102 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 ACACBO00763 2458 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 C4orf47A7E2U8 309 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 TULP2O00295 520 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 CALCAP01258 141 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 BRD2P25440 801 aaKnown RBP20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 NTSR1P30989 418 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 WASP42768 502 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 ZNF132P52740 706 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 PDE4CQ08493 712 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 KCNMA1Q12791 1236 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 NCAPHQ15003 741 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 CNGA2Q16280 664 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 FYB2Q5VWT5 728 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 KIAA1211LQ6NV74 962 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 LCLAT1Q6UWP7 414 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 CYP2U1Q7Z449 544 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 TRMT11Q7Z4G4 463 aaKnown RBP20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 TMEFF1Q8IYR6 380 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 GABRG3Q99928 467 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 SIX2Q9NPC8 291 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 DNAJC12Q9UKB3 198 aa20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 KMT2BQ9UMN6 2715 aaPredicted RBP20.51■□□□□ 0.87
RALGPS1-206ENST00000394011 KCNK5O95279 499 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 PENKP01210 267 aaPredicted RBP20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 HOXB2P14652 356 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 DHPSP49366 369 aaPredicted RBP20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 ZNF165P49910 485 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 IRX4P78413 519 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 GOLGA8FQ08AF8 430 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 GOLGA8DPQ0D2H9 430 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 BST2Q10589 180 aaKnown RBP20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 STILQ15468 1287 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 FKBP15Q5T1M5 1219 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 PEAR1Q5VY43 1037 aaPredicted RBP20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 PM20D1Q6GTS8 502 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 XPO6Q96QU8 1125 aaKnown RBP20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 BPIFA3Q9BQP9 254 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 ZSWIM1Q9BR11 485 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 FUCA2Q9BTY2 467 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 PLK2Q9NYY3 685 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 BCCIPQ9P287 314 aaKnown RBP eCLIP20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 LIMA1Q9UHB6 759 aaKnown RBP20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 PCDH15Q96QU1 1955 aa20.5■□□□□ 0.87
RALGPS1-206ENST00000394011 ADAMTS9Q9P2N4 1935 aa20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 GON4LQ3T8J9 2241 aa20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 SMTNL1A8MU46 457 aa20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 XPO1O14980 1071 aaKnown RBP20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 KHNYNO15037 678 aaKnown RBP20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 COPB1P53618 953 aaKnown RBP20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 SPDYCQ5MJ68 293 aa20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 LPCAT2Q7L5N7 544 aa20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 NDRG1Q92597 394 aaKnown RBP20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 PIGKQ92643 395 aa20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 SPACA7Q96KW9 195 aa20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 LRRC4Q9HBW1 653 aa20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 CALCOCO1Q9P1Z2 691 aa20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 EVLQ9UI08 416 aaPredicted RBP20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 RASAL2Q9UJF2 1139 aa20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 AJAP1Q9UKB5 411 aaPredicted RBP20.49■□□□□ 0.87
RALGPS1-206ENST00000394011 BECN2A8MW95 431 aa20.48■□□□□ 0.87
RALGPS1-206ENST00000394011 M0QYV0 167 aa20.48■□□□□ 0.87
RALGPS1-206ENST00000394011 SETSIPP0DME0 302 aa20.48■□□□□ 0.87
RALGPS1-206ENST00000394011 RALAP11233 206 aa20.48■□□□□ 0.87
RALGPS1-206ENST00000394011 ZNF18P17022 549 aa20.48■□□□□ 0.87
RALGPS1-206ENST00000394011 NDUFV2P19404 249 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms