RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 CXCR3P49682 368 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 HIF1AQ16665 826 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 TUBB8Q3ZCM7 444 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 VSTM1Q6UX27 236 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 ARFGAP2Q8N6H7 521 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 C9orf72Q96LT7 481 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 TMEM175Q9BSA9 504 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 SF3B1O75533 1304 aaKnown RBP eCLIP22.98■■□□□ 1.27
HMGA2-203ENST00000393578 SCN5AQ14524 2016 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 TLDC2A0PJX2 215 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 ALOX15BO15296 676 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 MAP3K6O95382 1288 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 ABHD2P08910 425 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 FGFR3P22607 806 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 NRLP54845 237 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 TLE2Q04725 743 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 CTXN3Q4LDR2 81 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 C1orf53Q5VUE5 145 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 ANKRD22Q5VYY1 191 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 C4orf22Q6V702 233 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 EPS8L3Q8TE67 593 aaKnown RBP22.98■■□□□ 1.27
HMGA2-203ENST00000393578 GPR62Q9BZJ7 368 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 ETNK2Q9NVF9 386 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 MARCH5Q9NX47 278 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 OR6C75A6NL08 312 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 EEF2KO00418 725 aaKnown RBP22.97■■□□□ 1.27
HMGA2-203ENST00000393578 RGS16O15492 202 aaPredicted RBP22.97■■□□□ 1.27
HMGA2-203ENST00000393578 CREB3O43889 395 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 TCEA3O75764 348 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 BASP1P80723 227 aaKnown RBP22.97■■□□□ 1.27
HMGA2-203ENST00000393578 SEMA3BQ13214 749 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 DPYSQ14117 519 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 ZNF280DQ6N043 979 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 MFSD5Q6N075 450 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 KCNT2Q6UVM3 1135 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 RFX8Q6ZV50 586 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 CEP57Q86XR8 500 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 OLFM3Q96PB7 478 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 QKIQ96PU8 341 aaKnown RBP eCLIP22.97■■□□□ 1.279e-7■■■□□ 18.4
HMGA2-203ENST00000393578 CAPS2Q9BXY5 557 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 PPP1R12CQ9BZL4 782 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 WDCPQ9H6R7 721 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 ABCC13Q9NSE7 274 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 PCDHB5Q9Y5E4 795 aa22.97■■□□□ 1.27
HMGA2-203ENST00000393578 HACD1B0YJ81 288 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 HPDP32754 393 aaPredicted RBP22.96■■□□□ 1.27
HMGA2-203ENST00000393578 HCAR3P49019 387 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 ARL4CP56559 192 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 MAGOHP61326 146 aaKnown RBP22.96■■□□□ 1.27
HMGA2-203ENST00000393578 YWHAGP61981 247 aaKnown RBP eCLIP22.96■■□□□ 1.27
HMGA2-203ENST00000393578 ELAVL2Q12926 359 aaKnown RBP22.96■■□□□ 1.27
HMGA2-203ENST00000393578 TRIM60Q495X7 471 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 SCN4BQ8IWT1 228 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 C8orf48Q96LL4 319 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 SERPINB12Q96P63 405 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 STMN4Q9H169 189 aaPredicted RBP22.96■■□□□ 1.27
HMGA2-203ENST00000393578 VWA8A3KMH1 1905 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 TBKBP1A7MCY6 615 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 GOLGA8MH3BSY2 632 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 TRIM66O15016 1216 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 EIF3HO15372 352 aaKnown RBP eCLIP22.96■■□□□ 1.27
HMGA2-203ENST00000393578 DGKIO75912 1065 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 CYP2C18P33260 490 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 MAGEA11P43364 429 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 ATP1A2P50993 1020 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 ZNF135P52742 658 aaPredicted RBP22.96■■□□□ 1.27
HMGA2-203ENST00000393578 ZNF771Q7L3S4 317 aaPredicted RBP22.96■■□□□ 1.27
HMGA2-203ENST00000393578 TAC4Q86UU9 113 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 DQX1Q8TE96 717 aaKnown RBP22.96■■□□□ 1.27
HMGA2-203ENST00000393578 ANLNQ9NQW6 1124 aa22.96■■□□□ 1.27
HMGA2-203ENST00000393578 XPO7Q9UIA9 1087 aaKnown RBP22.96■■□□□ 1.27
HMGA2-203ENST00000393578 SMIM23A6NLE4 172 aa22.95■■□□□ 1.26
HMGA2-203ENST00000393578 I6L893 689 aaPredicted RBP22.95■■□□□ 1.26
HMGA2-203ENST00000393578 CHADO15335 359 aa22.95■■□□□ 1.26
HMGA2-203ENST00000393578 GCATO75600 419 aa22.95■■□□□ 1.26
HMGA2-203ENST00000393578 AGTP01019 485 aa22.95■■□□□ 1.26
HMGA2-203ENST00000393578 IGLV3-25P01717 112 aa22.95■■□□□ 1.26
HMGA2-203ENST00000393578 GALTP07902 379 aa22.95■■□□□ 1.26
HMGA2-203ENST00000393578 PDIA2Q13087 525 aaKnown RBP22.95■■□□□ 1.26
HMGA2-203ENST00000393578 FUT10Q6P4F1 479 aa22.95■■□□□ 1.26
HMGA2-203ENST00000393578 DEFB128Q7Z7B8 93 aa22.95■■□□□ 1.26
HMGA2-203ENST00000393578 TAB3Q8N5C8 712 aaPredicted RBP22.95■■□□□ 1.26
HMGA2-203ENST00000393578 TFB1MQ8WVM0 346 aaKnown RBP22.95■■□□□ 1.26
HMGA2-203ENST00000393578 CCDC77Q9BR77 488 aa22.95■■□□□ 1.26
HMGA2-203ENST00000393578 WBP1LQ9NX94 342 aa22.95■■□□□ 1.26
HMGA2-203ENST00000393578 MFHAS1Q9Y4C4 1052 aa22.95■■□□□ 1.26
HMGA2-203ENST00000393578 TCRBV7S3A2A0A539 114 aa22.94■■□□□ 1.26
HMGA2-203ENST00000393578 TMEM63AO94886 807 aa22.94■■□□□ 1.26
HMGA2-203ENST00000393578 SLCO1A2P46721 670 aa22.94■■□□□ 1.26
HMGA2-203ENST00000393578 DMTNQ08495 405 aa22.94■■□□□ 1.26
HMGA2-203ENST00000393578 AUHQ13825 339 aaKnown RBP22.94■■□□□ 1.26
HMGA2-203ENST00000393578 KCNJ11Q14654 390 aa22.94■■□□□ 1.26
HMGA2-203ENST00000393578 STAT4Q14765 748 aa22.94■■□□□ 1.26
HMGA2-203ENST00000393578 PAFAH1B3Q15102 231 aaKnown RBP22.94■■□□□ 1.26
HMGA2-203ENST00000393578 LONRF1Q17RB8 773 aa22.94■■□□□ 1.26
HMGA2-203ENST00000393578 SKIDA1Q1XH10 827 aa22.94■■□□□ 1.26
HMGA2-203ENST00000393578 BTBD8Q5XKL5 378 aa22.94■■□□□ 1.26
HMGA2-203ENST00000393578 ZBED8Q8IZ13 594 aa22.94■■□□□ 1.26
HMGA2-203ENST00000393578 LRRC43Q8N309 656 aa22.94■■□□□ 1.26
HMGA2-203ENST00000393578 RAB6BQ9NRW1 208 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms