RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 ORC6Q9Y5N6 252 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 SYCE1LA8MT33 242 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 DHX15O43143 795 aaKnown RBP8.35□□□□□ -1.07
ATXN3-203ENST00000393287 HNRNPCL1O60812 293 aaKnown RBP8.35□□□□□ -1.07
ATXN3-203ENST00000393287 MAPK9P45984 424 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 TUBP50607 506 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 TMPRSS15P98073 1019 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 WASHC5Q12768 1159 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 MPPE1Q53F39 396 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 CDCA2Q69YH5 1023 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-203ENST00000393287 USP45Q70EL2 814 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 ZNF571Q7Z3V5 609 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-203ENST00000393287 STK40Q8N2I9 435 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 TEX12Q9BXU0 123 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 NOVA2Q9UNW9 492 aaKnown RBP8.35□□□□□ -1.07
ATXN3-203ENST00000393287 SMIM28A0A1B0GU29 152 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 TSHRP16473 764 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 ZRANB3Q5FWF4 1079 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 LRRC55Q6ZSA7 311 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 FAM35AQ86V20 835 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 DEFB106AQ8N104 65 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 FUCA2Q9BTY2 467 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 NLNQ9BYT8 704 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 SMYD3Q9H7B4 428 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 PCDH9Q9HC56 1237 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 TRMT6Q9UJA5 497 aaKnown RBP8.35□□□□□ -1.07
ATXN3-203ENST00000393287 CCDC130P13994 396 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 MAPK1P28482 360 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 PRKAA2P54646 552 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 SPDYCQ5MJ68 293 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 UHMK1Q8TAS1 419 aaKnown RBP8.35□□□□□ -1.07
ATXN3-203ENST00000393287 RBM15Q96T37 977 aaKnown RBP eCLIP8.35□□□□□ -1.07
ATXN3-203ENST00000393287 ERP44Q9BS26 406 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 ZYG11BQ9C0D3 744 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 SARS2Q9NP81 518 aaKnown RBP8.35□□□□□ -1.07
ATXN3-203ENST00000393287 KIAA1522Q9P206 1035 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-203ENST00000393287 RAB23Q9ULC3 237 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 PTPRJQ12913 1337 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 FRMD3A2A2Y4 597 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 ZWINTO95229 277 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 APRTP07741 180 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 SERPINB8P50452 374 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 CCR3P51677 355 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 TRIM60Q495X7 471 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 OTOP2Q7RTS6 562 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 MYCBPAPQ8TBZ2 947 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 STK32AQ8WU08 396 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 TEKT4Q8WW24 435 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 ULBP1Q9BZM6 244 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 RABEP2Q9H5N1 569 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 ABCB6Q9NP58 842 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 PCDHA3Q9Y5H8 950 aa8.35□□□□□ -1.07
ATXN3-203ENST00000393287 RBM47A0AV96 593 aaKnown RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 PDE2AO00408 941 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 SNRPAP09012 282 aaKnown RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 OR1E1P30953 314 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 PCK1P35558 622 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 MRPS5P82675 430 aaKnown RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 CDH17Q12864 832 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 NCAPHQ15003 741 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 SPANXN3Q5MJ09 141 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 THEMIS2Q5TEJ8 643 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 RAD9BQ6WBX8 426 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 VCX3AQ9NNX9 186 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 PCDHGC3Q9UN70 934 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 NR2E1Q9Y466 385 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 KPNA5O15131 536 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 GRM6O15303 877 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 CDH16O75309 829 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 PYGBP11216 843 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 CST5P28325 142 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 PRUNE1Q86TP1 453 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 GDAP1L1Q96MZ0 367 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 POLR1EQ9GZS1 481 aaKnown RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 RIC8BQ9NVN3 520 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 TTC7AQ9ULT0 858 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 APODP05090 189 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 ART3Q13508 389 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 AGAP9Q5VTM2 703 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 PPP2R2DQ66LE6 453 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 FUT10Q6P4F1 479 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 ECHDC2Q86YB7 292 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 LMNTD2Q8IXW0 634 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 SHC3Q92529 594 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 CHMP6Q96FZ7 201 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 ZNF670Q9BS34 389 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 SMARCAL1Q9NZC9 954 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 ANKRD6Q9Y2G4 727 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 SIK3Q9Y2K2 1263 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 NDUFS2O75306 463 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 RHOBTB1O94844 696 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 SESN2P58004 480 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 SLC7A5Q01650 507 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 BCL2L1Q07817 233 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 NT5DC3Q86UY8 548 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 SPATA20Q8TB22 786 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 MAGEC3Q8TD91 643 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 ACTR5Q9H9F9 607 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 DCDC2Q9UHG0 476 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 CCDC22O60826 627 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms