RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 H1FNTQ75WM6 255 aaPredicted RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 ZFPM1Q8IX07 1006 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 FAM185AQ8N0U4 392 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 CAMKVQ8NCB2 501 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 NFKBIDQ8NI38 313 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 MDM1Q8TC05 714 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 DENND1AQ8TEH3 1009 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 FRAT1Q92837 279 aaPredicted RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 CNDP1Q96KN2 507 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 SPATA13Q96N96 652 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 WDFY2Q96P53 400 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 GCOM2Q9BZD3 368 aaPredicted RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 GOLPH3LQ9H4A5 285 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ZNF112Q9UJU3 913 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ANGEL1Q9UNK9 670 aaKnown RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 MTMR6Q9Y217 621 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ADAM20O43506 726 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ENTPD3O75355 529 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 CSPG5O95196 566 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ENO1P06733 434 aaKnown RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 SUPT20HL2P0C7V6 817 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 YBX3P16989 372 aaKnown RBP eCLIP3.71□□□□□ -1.829e-7■■□□□ 13.3
XRN1-202ENST00000392981 NR1D1P20393 614 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 MGAT1P26572 445 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ALDH3A2P51648 485 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 GPS2Q13227 327 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 WSCD2Q2TBF2 565 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 SUPT20HL1Q3ZLR7 823 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ADGRF1Q5T601 910 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ERMARDQ5T6L9 678 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 KCTD9Q7L273 389 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 OTOP1Q7RTM1 612 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 KCNK18Q7Z418 384 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ULK2Q8IYT8 1036 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 FAM9CQ8IZT9 166 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 MFSD4AQ8N468 514 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 SPATA20Q8TB22 786 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 TMEM171Q8WVE6 324 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ITFG2Q969R8 447 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 FAM81BQ96LP2 452 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 HNRNPABQ99729 332 aaKnown RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 NAA11Q9BSU3 229 aaPredicted RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 METTL22Q9BUU2 404 aaPredicted RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 SLC28A3Q9HAS3 691 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 CFAP97Q9P2B7 532 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 SLC24A2Q9UI40 661 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 CDYLQ9Y232 598 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 TDRD9Q8NDG6 1382 aaKnown RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 LRRC53A6NM62 1247 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 TMEM110-MUSTN1A8MSY1 372 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 TBX10O75333 385 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 DLGAP3O95886 979 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 FYNP06241 537 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 HMBSP08397 361 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 CRKLP46109 303 aaKnown RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 SLC26A5P58743 744 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 POU6F2P78424 691 aaPredicted RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 MZT1Q08AG7 82 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 INSCQ1MX18 579 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 EDRF1Q3B7T1 1238 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 MGAT5BQ3V5L5 792 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 XKR9Q5GH70 373 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 RUFY3Q7L099 469 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 SYT2Q8N9I0 419 aaPredicted RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 MAML3Q96JK9 1138 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 MGME1Q9BQP7 344 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 SENP2Q9HC62 589 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 SNX15Q9NRS6 342 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 DDX18Q9NVP1 670 aaKnown RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 COX16Q9P0S2 106 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 PEMTQ9UBM1 199 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 TLK1Q9UKI8 766 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 HCN2Q9UL51 889 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 IGF1RP08069 1367 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 FAM90A27PA6NNH2 459 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 EIF3DO15371 548 aaKnown RBP eCLIP3.71□□□□□ -1.82
XRN1-202ENST00000392981 STRNO43815 780 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 KINO60870 393 aaKnown RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 IPO7O95373 1038 aaKnown RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 CYC1P08574 325 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 CCDC172P0C7W6 258 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 EPB41P11171 864 aaKnown RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 C17orf67Q0P5P2 114 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 TBCCQ15814 346 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 AP5B1Q2VPB7 878 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 GLRA4Q5JXX5 417 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 TAF2Q6P1X5 1199 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 AFTPHQ6ULP2 937 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 TAOK1Q7L7X3 1001 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 OR1N1Q8NGS0 311 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 UBLCP1Q8WVY7 318 aaPredicted RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 CNOT9Q92600 299 aaKnown RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 VPS50Q96JG6 964 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 BBS4Q96RK4 519 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 GAL3ST4Q96RP7 486 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 SLC12A9Q9BXP2 914 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 HPS4Q9NQG7 708 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 GIMAP4Q9NUV9 329 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 USP40Q9NVE5 1235 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 TMED5Q9Y3A6 229 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms