RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 PNLDC1Q8NA58 520 aaKnown RBP5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 SLC22A17Q8WUG5 538 aa5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 TRAPPC12Q8WVT3 735 aa5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 NELL1Q92832 810 aa5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 MCRS1Q96EZ8 462 aa5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 ADGRE3Q9BY15 652 aa5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 R3HDMLQ9H3Y0 253 aa5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 PRDM13Q9H4Q3 707 aa5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 CCDC134Q9H6E4 229 aa5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 MLXIPQ9HAP2 919 aa5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 AGO4Q9HCK5 861 aaKnown RBP5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 NFU1Q9UMS0 254 aa5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 UBE2J1Q9Y385 318 aaPredicted RBP5.05□□□□□ -1.6
SNORA40.2-201ENST00000390847 BTBD19C9JJ37 291 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 POC1B-GALNT4F8VUJ3 575 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 CLIC1O00299 241 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 PIP5K1CO60331 668 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 C1QL1O75973 258 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 THBS4P35443 961 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 WDR5P61964 334 aaKnown RBP5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 FOXO1Q12778 655 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 RPS6KA2Q15349 733 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 FAM187BQ17R55 369 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 CERKLQ49MI3 558 aaPredicted RBP5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 TMEM63BQ5T3F8 832 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 PRAMEF17Q5VTA0 474 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 FCRLBQ6BAA4 426 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 JMJD6Q6NYC1 403 aaPredicted RBP5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 VSTM1Q6UX27 236 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 RAB11FIP2Q7L804 512 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 TRABD2AQ86V40 505 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 SLC44A2Q8IWA5 706 aaPredicted RBP5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 C16orf71Q8IYS4 520 aaPredicted RBP5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 GALNT4Q8N4A0 578 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 NKAPQ8N5F7 415 aaKnown RBP5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 LINC01465Q8N7H1 131 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 OR52L2PQ8NGH6 319 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 ADAMTS18Q8TE60 1221 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 HMGB4Q8WW32 186 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 RSC1A1Q92681 617 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 REXO5Q96IC2 774 aaKnown RBP5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 FAR2Q96K12 515 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 ELAC1Q9H777 363 aaKnown RBP5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 FZD4Q9ULV1 537 aa5.04□□□□□ -1.6
SNORA40.2-201ENST00000390847 PLEKHD1A6NEE1 506 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 M0QZQ0 153 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 IPO5O00410 1097 aaKnown RBP5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 PROP1O75360 226 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 MATN1P21941 496 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 INHBEP58166 350 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 RNASELQ05823 741 aaKnown RBP5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 SF3A3Q12874 501 aaKnown RBP eCLIP5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 LARS2Q15031 903 aaKnown RBP5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 POSTNQ15063 836 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 CNGA3Q16281 694 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 C4orf46Q504U0 113 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 INO80DQ53TQ3 878 aaPredicted RBP5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 AWAT1Q58HT5 328 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 ACSM6Q6P461 480 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 NFRKBQ6P4R8 1299 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 GALNT15Q8N3T1 639 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 FAM98AQ8NCA5 519 aaKnown RBP5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 SCAMP5Q8TAC9 235 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 STT3BQ8TCJ2 826 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 NPIPB3Q92617 1050 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 C3orf49Q96BT1 292 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 SCLT1Q96NL6 688 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 TRAPPC9Q96Q05 1148 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 FAM167BQ9BTA0 163 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 TMEM120AQ9BXJ8 343 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 PABPC3Q9H361 631 aaKnown RBP5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 PRDM8Q9NQV8 689 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 RXFP3Q9NSD7 469 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 ABHD10Q9NUJ1 306 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 CNTN6Q9UQ52 1028 aa5.03□□□□□ -1.6
SNORA40.2-201ENST00000390847 TCRBV5S1A1TA0A578 114 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 GXYLT2A0PJZ3 443 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 MANSC4A6NHS7 340 aaPredicted RBP5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 EFCAB8A8MWE9 144 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 TTC34A8MYJ7 566 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 TMEM232C9JQI7 657 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 M0QYT0 321 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 LARGE1O95461 756 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 CHRM5P08912 532 aaPredicted RBP5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 NHLRC4P0CG21 123 aaPredicted RBP5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 VEGFAP15692 232 aaPredicted RBP5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 DUSP1P28562 367 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 SLC8A1P32418 973 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 PNLIPRP1P54315 467 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 TANGO2Q6ICL3 276 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 C16orf89Q6UX73 402 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 RRAGAQ7L523 313 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 CHSY1Q86X52 802 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 OTUD7AQ8TE49 926 aaPredicted RBP5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 AKAP1Q92667 903 aaKnown RBP eCLIP5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 HIC2Q96JB3 615 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 RITA1Q96K30 269 aa5.02□□□□□ -1.61
SNORA40.2-201ENST00000390847 ASB2Q96Q27 587 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms