RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ABCC13Q9NSE7 274 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 ETNK2Q9NVF9 386 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 ASIC3Q9UHC3 531 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 FBXW11Q9UKB1 542 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 MAGED2Q9UNF1 606 aaPredicted RBP12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 SCML2Q9UQR0 700 aa12.66□□□□□ -0.38
SPTBN1-203ENST00000389980 NUP205Q92621 2012 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 LCHNA4D1U4 455 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 APOL1O14791 398 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 GAS8O95995 478 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 YWHAQP27348 245 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 NRLP54845 237 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 GDF10P55107 478 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 HTRA4P83105 476 aaPredicted RBP12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 TAF10Q12962 218 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 RASIP1Q5U651 963 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 ZDHHC24Q6UX98 284 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 DDX53Q86TM3 631 aaKnown RBP12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 FIBCD1Q8N539 461 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 RNF34Q969K3 372 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 FBXO32Q969P5 355 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 FAF2Q96CS3 445 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 PGAP3Q96FM1 320 aaPredicted RBP12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 HERC2P3Q9BVR0 1158 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 TKTL2Q9H0I9 626 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 FBXO44Q9H4M3 255 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 WDCPQ9H6R7 721 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 RRN3Q9NYV6 651 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 NEU2Q9Y3R4 380 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 PLXNA4Q9HCM2 1894 aa12.65□□□□□ -0.38
SPTBN1-203ENST00000389980 VGLL3A8MV65 326 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 SGK1O00141 431 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 FGF18O76093 207 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 TBX18O95935 607 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 KRT14P02533 472 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 URODP06132 367 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 CA8P35219 290 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 CXCR3P49682 368 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 EIF3EP60228 445 aaKnown RBP12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 SMARCB1Q12824 385 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 PTK6Q13882 451 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 TFDP2Q14188 446 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 EFHC2Q5JST6 749 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 SLC9A4Q6AI14 798 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 EMBQ6PCB8 327 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 DRICH1Q6PGQ1 229 aaPredicted RBP12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 MON1AQ86VX9 555 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 ALLCQ8N6M5 410 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 TSEN2Q8NCE0 465 aaKnown RBP12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 FBXO25Q8TCJ0 367 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 RNF139Q8WU17 664 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 P3H4Q92791 437 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 NKD2Q969F2 451 aaPredicted RBP12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 OXCT2Q9BYC2 517 aaPredicted RBP12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 ZDHHC18Q9NUE0 388 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 IL37Q9NZH6 218 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 FEZ2Q9UHY8 353 aaPredicted RBP12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 PCDHB12Q9Y5F1 795 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 SLC38A8A6NNN8 435 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 IFNB1P01574 187 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 IGLV3-25P01717 112 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 RBP3P10745 1247 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 IVDP26440 423 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 KLRC2P26717 231 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 ADCY8P40145 1251 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 ARL4AP40617 200 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 GBE1Q04446 702 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 SLC10A2Q12908 348 aaPredicted RBP12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 UNC45BQ8IWX7 931 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 TTC13Q8NBP0 860 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 ZNF461Q8TAF7 563 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 C2orf15Q8WU43 125 aaKnown RBP12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 SPATA17Q96L03 361 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 DRG1Q9Y295 367 aaKnown RBP12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 SLC4A7Q9Y6M7 1214 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 PDE4DIPQ5VU43 2346 aa12.64□□□□□ -0.39
SPTBN1-203ENST00000389980 MCF2LO15068 1137 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 TP73O15350 636 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 IRAK2O43187 625 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 ABLIM3O94929 683 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 F9P00740 461 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 ITGAVP06756 1048 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 SPATA31D3P0C874 917 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 DRG2P55039 364 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 HNRNPH2P55795 449 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 RPL10AP62906 217 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 NOMO1Q15155 1222 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 SPATA31D4Q6ZUB0 917 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 SPRED2Q7Z698 418 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 HERC6Q8IVU3 1022 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 TAB3Q8N5C8 712 aaPredicted RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 KLHL23Q8NBE8 558 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 NTAN1Q96AB6 310 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 SLC9A7Q96T83 725 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 SMOC2Q9H3U7 446 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 CYP4F11Q9HBI6 524 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 ARHGEF4Q9NR80 690 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 AFF4Q9UHB7 1163 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 INSL6Q9Y581 213 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 FAM92AA1XBS5 289 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms