RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 IRX3P78415 501 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CD83Q01151 205 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PSME1Q06323 249 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GPS2Q13227 327 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MRPL49Q13405 166 aaKnown RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TUBB3Q13509 450 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GRAPQ13588 217 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZNF267Q14586 743 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 NR1D2Q14995 579 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RNPS1Q15287 305 aaKnown RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 NEUROD2Q15784 382 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PAN2Q504Q3 1202 aaKnown RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PLEKHO1Q53GL0 409 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 COX20Q5RI15 118 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 KIAA0319Q5VV43 1072 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RCSD1Q6JBY9 416 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 HCP5Q6MZN7 132 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SMARCD3Q6STE5 483 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TRIM72Q6ZMU5 477 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 NEK10Q6ZWH5 1172 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TUBA1AQ71U36 451 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZNF572Q7Z3I7 529 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CLNKQ7Z7G1 428 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZNF227Q86WZ6 799 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CPNE8Q86YQ8 564 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TEX2Q8IWB9 1127 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 LAS2Q8IYD9 372 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SLFN12Q8IYM2 578 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TMEM99Q8N816 258 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZNF614Q8N883 585 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ENAHQ8N8S7 591 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 NEXN-AS1Q8NBZ9 246 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 OR10V1Q8NGI7 309 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TDRD7Q8NHU6 1098 aaKnown RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MYCBPAPQ8TBZ2 947 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PHOSPHO1Q8TCT1 267 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 AFAP1L1Q8TED9 768 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PNISRQ8TF01 805 aaKnown RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TMED6Q8WW62 240 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 JPH3Q8WXH2 748 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GCDHQ92947 438 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CCDC74AQ96AQ1 378 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ERLEC1Q96DZ1 483 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CFAP57Q96MR6 1250 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 WDFY2Q96P53 400 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZSWIM1Q9BR11 485 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SLC25A39Q9BZJ4 359 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RAB33BQ9H082 229 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZMAT3Q9HA38 289 aaKnown RBP-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SLC39A2Q9NP94 309 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 C2orf42Q9NWW7 574 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GFOD1Q9NXC2 390 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PHF11Q9UIL8 331 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZNF391Q9UJN7 358 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TRAK1Q9UPV9 953 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TEX15Q9BXT5 2789 aa-1.97□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ADGRA2Q96PE1 1338 aa-1.97□□□□□ -2.73
RNU6-1340P-201ENST00000384438 IGLV2-18A0A075B6J9 118 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 TRGV11A0A075B6L2 103 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 IGKV1-9A0A0C4DH69 117 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 A0A1W2PPC1 479 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 TCRBV5S1A1TA0A578 114 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 LILRA5A6NI73 299 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 C16orf96A6NNT2 1141 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 PRR5-ARHGAP8B1AHC4 643 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 ANKRD63C9JTQ0 380 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 RGS14O43566 566 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 SPRY3O43610 288 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 NPHS1O60500 1241 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 H2AFYO75367 372 aaKnown RBP-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 ATP1A1P05023 1023 aaKnown RBP-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 NR2F6P10588 404 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 CPA1P15085 419 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 MGAT1P26572 445 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 NOP2P46087 812 aaKnown RBP-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 PIK3CGP48736 1102 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 TNNI2P48788 182 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 RENBPP51606 427 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 SESN2P58004 480 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 IGLV3-21P80748 117 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 FMO1Q01740 532 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 FMODQ06828 376 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 TRAF2Q12933 501 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 PABPC4Q13310 644 aaKnown RBP eCLIP-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 ZNF211Q13398 564 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 SNTA1Q13424 505 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 MAP3K11Q16584 847 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 OCLNQ16625 522 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 CPEB4Q17RY0 729 aaKnown RBP eCLIP-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 GNPTABQ3T906 1256 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 EIPR1Q53HC9 387 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 WIPI1Q5MNZ9 446 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 FAM120AOSQ5T036 256 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 CFAP70Q5T0N1 1121 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 STEAP3Q658P3 488 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 PPP4R3AQ6IN85 833 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 FAM53AQ6NSI3 398 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 HMBOX1Q6NT76 420 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 ANKRD16Q6P6B7 361 aa-1.98□□□□□ -2.73
RNU6-1340P-201ENST00000384438 IL27RAQ6UWB1 636 aa-1.98□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms