RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 KPNA6O60684 536 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 DUSP11O75319 330 aaKnown RBP9.26□□□□□ -0.93
GPNMB-202ENST00000381990 PIM1P11309 404 aaPredicted RBP9.26□□□□□ -0.93
GPNMB-202ENST00000381990 CD19P15391 556 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 SSTR1P30872 391 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 GJC1P36383 396 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 CDH8P55286 799 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 RPL26P61254 145 aaKnown RBP9.26□□□□□ -0.93
GPNMB-202ENST00000381990 PURAQ00577 322 aaKnown RBP9.26□□□□□ -0.93
GPNMB-202ENST00000381990 IZUMO2Q6UXV1 221 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 POLNQ7Z5Q5 900 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 ANKMY2Q8IV38 441 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 NME8Q8N427 588 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 TTC39CQ8N584 583 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 RAB3IL1Q8TBN0 382 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 NMUR2Q9GZQ4 415 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 LHX5Q9H2C1 402 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 SMYD3Q9H7B4 428 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 NDUFA13Q9P0J0 144 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 SSX2IPQ9Y2D8 614 aa9.26□□□□□ -0.93
GPNMB-202ENST00000381990 C17orf102A2RUQ5 167 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 TMEM191CA6NGB0 347 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 DCAF8L1A6NGE4 600 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 H3BRJ5 948 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 CREB3O43889 395 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 CILPO75339 1184 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 PENKP01210 267 aaPredicted RBP9.25□□□□□ -0.93
GPNMB-202ENST00000381990 IFNB1P01574 187 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 ETS1P14921 441 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 AMPD1P23109 780 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 CTGFP29279 349 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 HOXC8P31273 242 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 CDKN2BP42772 138 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 PLCB3Q01970 1234 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 PIGHQ14442 188 aaPredicted RBP9.25□□□□□ -0.93
GPNMB-202ENST00000381990 SNX17Q15036 470 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 CNPY1Q3B7I2 92 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 ATG16L1Q676U5 607 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 TMEM130Q8N3G9 435 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 WDTC1Q8N5D0 677 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 FBXO36Q8NEA4 188 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 SNX27Q96L92 541 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 SIKE1Q9BRV8 207 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 TMEM121Q9BTD3 319 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 EIF2AQ9BY44 585 aaKnown RBP9.25□□□□□ -0.93
GPNMB-202ENST00000381990 IQCGQ9H095 443 aaKnown RBP9.25□□□□□ -0.93
GPNMB-202ENST00000381990 ARHGEF4Q9NR80 690 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 SNTG2Q9NY99 539 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 TAGLN3Q9UI15 199 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 WASF2Q9Y6W5 498 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 SPECC1L-ADORA2AF8WAN1 911 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 INHBAP08476 426 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 PABPC4LP0CB38 370 aaKnown RBP9.25□□□□□ -0.93
GPNMB-202ENST00000381990 FCGRTP55899 365 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 PTPN11Q06124 597 aaPredicted RBP9.25□□□□□ -0.93
GPNMB-202ENST00000381990 CBLBQ13191 982 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 PTK7Q13308 1070 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 EFTUD2Q15029 972 aaKnown RBP eCLIP9.25□□□□□ -0.93
GPNMB-202ENST00000381990 DENND1BQ6P3S1 775 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 RIPOR1Q6ZS17 1223 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 MARK2Q7KZI7 788 aaKnown RBP9.25□□□□□ -0.93
GPNMB-202ENST00000381990 ULK2Q8IYT8 1036 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 C7orf31Q8N865 590 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 NIPA2Q8N8Q9 360 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 SLC4A11Q8NBS3 891 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 RBM15BQ8NDT2 890 aaKnown RBP9.25□□□□□ -0.93
GPNMB-202ENST00000381990 SLC44A1Q8WWI5 657 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 CPT1BQ92523 772 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 ELOVL4Q9GZR5 314 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 ABT1Q9ULW3 272 aaKnown RBP9.25□□□□□ -0.93
GPNMB-202ENST00000381990 PLA2G4CQ9UP65 541 aa9.25□□□□□ -0.93
GPNMB-202ENST00000381990 SMIM31A0A1B0GVY4 71 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 TCRBV5S1A1TA0A578 114 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 PI4K2BG5E9Z4 385 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 UBTFL6P0CB48 400 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 CRYBB1P53674 252 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 ZNF200P98182 395 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 INCA1Q0VD86 236 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 CDC16Q13042 620 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 ZBTB6Q15916 424 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 MFSD14CQ5VZR4 134 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 DNAJC24Q6P3W2 148 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 SH2D5Q6ZV89 423 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 TTC7BQ86TV6 843 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 TRPV1Q8NER1 839 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 TTC17Q96AE7 1141 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 TMEM176AQ96HP8 235 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 HHIPL1Q96JK4 782 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 FAM111AQ96PZ2 611 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 TUBGCP5Q96RT8 1024 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 NDNQ99608 321 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 EPB41L1Q9H4G0 881 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 TMCO1Q9UM00 188 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 BARX2Q9UMQ3 279 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 GOLGA8SH3BPF8 625 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 GOLGA8MH3BSY2 632 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 GOLGA8RI6L899 631 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 C6orf222P0C671 652 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 CYBAP13498 195 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 BGNP21810 368 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms