RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 UGT2B28Q9BY64 529 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 PUS3Q9BZE2 481 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 TMEM245Q9H330 911 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 SLC39A2Q9NP94 309 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 RPRD1BQ9NQG5 326 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 DNAJC28Q9NX36 388 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 FBXO2Q9UK22 296 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 PSMD13Q9UNM6 376 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 SNX3O60493 162 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 MTA2O94776 668 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 WDR47O94967 919 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 NR3C1P04150 777 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 HTR7P34969 479 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 SPOPLQ6IQ16 392 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 TBC1D16Q8TBP0 767 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 POF1BQ8WVV4 589 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 CRAMP1Q96RY5 1269 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 SENP7Q9BQF6 1050 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 C6orf62Q9GZU0 229 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 MRM3Q9HC36 420 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 DDX18Q9NVP1 670 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 ZNF180Q9UJW8 692 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 RAB23Q9ULC3 237 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 KIAA1024Q9UPX6 916 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 EFCAB10A6NFE3 127 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 EIF4E1BA6NMX2 242 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 PRRG1O14668 218 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 CTSHP09668 335 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 CYP2C8P10632 490 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 LRPAP1P30533 357 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 HIRAP54198 1017 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 DYNLL1P63167 89 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 DLG1Q12959 904 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 PLCL1Q15111 1095 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 TRIP13Q15645 432 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 SLC10A5Q5PT55 438 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 OR6B3Q8NGW1 331 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 NFKBIL1Q9UBC1 381 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 PRG3Q9Y2Y8 225 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 FAM205AQ6ZU69 1335 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 A0A0G2JND7 137 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 METTL21EPA6NDL7 271 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 C8BP07358 591 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 TXNP10599 105 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 DRD4P21917 467 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 CASP2P42575 452 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 CDK8P49336 464 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 FBXW4P57775 412 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 ZNF200P98182 395 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 MTMR2Q13614 643 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 SQLEQ14534 574 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 GALNT18Q6P9A2 607 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 CPNE5Q9HCH3 593 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 STK39Q9UEW8 545 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 WARS2Q9UGM6 360 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 KLHL3Q9UH77 587 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 AFF4Q9UHB7 1163 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 GRIP1Q9Y3R0 1128 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 GRIN2DO15399 1336 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 RNF103-CHMP3A0A140T963 221 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 HACD1B0YJ81 288 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 RBP1P09455 135 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 HOXA13P31271 388 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 TALDO1P37837 337 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 UBE2Q1Q7Z7E8 422 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 C8orf59Q8N0T1 100 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 TMEM35BQ8NCS4 154 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 ZNF564Q8TBZ8 553 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 DEPDC1BQ8WUY9 529 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 AGBL1Q96MI9 1066 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 PRKD2Q9BZL6 878 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 TRIM9Q9C026 710 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 NMRK1Q9NWW6 199 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 APEX2Q9UBZ4 518 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 ZNHIT2Q9UHR6 403 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 KLHL20Q9Y2M5 609 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 UBXN8O00124 270 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 STX11O75558 287 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 ZBTB11O95625 1053 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 ASMTLO95671 621 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 KRT1P04264 644 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 EIF2B2P49770 351 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 SERPINH1P50454 418 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 TSNQ15631 228 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 KNOP1Q1ED39 458 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 DRICH1Q6PGQ1 229 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 PIGWQ7Z7B1 504 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 ZDHHC17Q8IUH5 632 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 KATNAL2Q8IYT4 538 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 MARCH10Q8NA82 808 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 FNDC8Q8TC99 324 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 PTCD2Q8WV60 388 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 PPP1R36Q96LQ0 422 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 DEPDC7Q96QD5 511 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 CINPQ9BW66 212 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 TBC1D22BQ9NU19 505 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 SEC16AO15027 2179 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 BCORQ6W2J9 1755 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 ATP9AO75110 1047 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 NPPAP01160 153 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms