RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 APOBEC3GQ9HC16 384 aaKnown RBP14.31□□□□□ -0.12
SDC1-202ENST00000381150 DDX43Q9NXZ2 648 aaKnown RBP14.31□□□□□ -0.12
SDC1-202ENST00000381150 CNTNAP2Q9UHC6 1331 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 hCG_1818297A0A087WSY0 165 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 A0A0B4J269 797 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 SOWAHBA6NEL2 793 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 MCF2LO15068 1137 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 SNRPAP09012 282 aaKnown RBP14.31□□□□□ -0.12
SDC1-202ENST00000381150 RPL5P46777 297 aaKnown RBP14.31□□□□□ -0.12
SDC1-202ENST00000381150 SLC18A1P54219 525 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 TAF5Q15542 800 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 OASLQ15646 514 aaKnown RBP14.31□□□□□ -0.12
SDC1-202ENST00000381150 SLC44A4Q53GD3 710 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 SCYL2Q6P3W7 929 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 RELL1Q8IUW5 271 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 AVENQ9NQS1 362 aaPredicted RBP14.31□□□□□ -0.12
SDC1-202ENST00000381150 SLC17A6Q9P2U8 582 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 HSFX1Q9UBD0 423 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 PLA2G4CQ9UP65 541 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 LRRC37A2A6NM11 1700 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 SMIM31A0A1B0GVY4 71 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 NDC80O14777 642 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 ITM2AO43736 263 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 FARP2O94887 1054 aaPredicted RBP14.3□□□□□ -0.12
SDC1-202ENST00000381150 F7P08709 466 aaPredicted RBP14.3□□□□□ -0.12
SDC1-202ENST00000381150 UBA1P22314 1058 aaKnown RBP14.3□□□□□ -0.12
SDC1-202ENST00000381150 PSMD7P51665 324 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 NOMO3P69849 1222 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 OGDHQ02218 1023 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 PRKG1Q13976 671 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 VGLL4Q14135 290 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 KRT81Q14533 505 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 HSF5Q4G112 596 aaPredicted RBP14.3□□□□□ -0.12
SDC1-202ENST00000381150 LGSNQ5TDP6 509 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 PCGF5Q86SE9 256 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 CAAP1Q9H8G2 361 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 PNPOQ9NVS9 261 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 DICER1Q9UPY3 1922 aaKnown RBP14.3□□□□□ -0.12
SDC1-202ENST00000381150 FGFR3P22607 806 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 CBX3Q13185 183 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 TMC7Q7Z402 723 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 SEMA6AQ9H2E6 1030 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 CNTN6Q9UQ52 1028 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 POMPQ9Y244 141 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 OTOFQ9HC10 1997 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 A0A1B0GTW7 788 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 K7ERI5 159 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 STIP1P31948 543 aaKnown RBP14.3□□□□□ -0.12
SDC1-202ENST00000381150 ETV4P43268 484 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 MMRN1Q13201 1228 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 CCNIQ14094 377 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 MYLK3Q32MK0 819 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 ZNF677Q86XU0 584 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 RIOX2Q8IUF8 465 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 ZSCAN18Q8TBC5 510 aaPredicted RBP14.3□□□□□ -0.12
SDC1-202ENST00000381150 PPP4R1Q8TF05 950 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 DCUN1D1Q96GG9 259 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 TARS2Q9BW92 718 aaKnown RBP14.3□□□□□ -0.12
SDC1-202ENST00000381150 Q9H521 79 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 FBXO40Q9UH90 709 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 CDH22Q9UJ99 828 aa14.3□□□□□ -0.12
SDC1-202ENST00000381150 HBS1LQ9Y450 684 aaKnown RBP14.3□□□□□ -0.12
SDC1-202ENST00000381150 CAPN14A8MX76 684 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 FAM189A1O60320 539 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 FDFT1P37268 417 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 NUDT2P50583 147 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 SH3BGRP55822 239 aaPredicted RBP14.29□□□□□ -0.12
SDC1-202ENST00000381150 PRAMEP78395 509 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 DCTN2Q13561 401 aaKnown RBP14.29□□□□□ -0.12
SDC1-202ENST00000381150 FASTKD1Q53R41 847 aaKnown RBP14.29□□□□□ -0.12
SDC1-202ENST00000381150 MAP3K21Q5TCX8 1036 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 TTC39BQ5VTQ0 682 aaPredicted RBP14.29□□□□□ -0.12
SDC1-202ENST00000381150 CES4AQ5XG92 561 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 NXNQ6DKJ4 435 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 SLC26A11Q86WA9 606 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 ABRAQ8N0Z2 381 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 GPC2Q8N158 579 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 NLGN2Q8NFZ4 835 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 ADAM32Q8TC27 787 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 TMEM134Q9H6X4 195 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 USP29Q9HBJ7 922 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 PAIP2BQ9ULR5 123 aaKnown RBP14.29□□□□□ -0.12
SDC1-202ENST00000381150 AP4B1Q9Y6B7 739 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 TGDSO95455 350 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 ENO3P13929 434 aaPredicted RBP14.29□□□□□ -0.12
SDC1-202ENST00000381150 DUS1LQ6P1R4 473 aaKnown RBP14.29□□□□□ -0.12
SDC1-202ENST00000381150 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.29□□□□□ -0.12
SDC1-202ENST00000381150 DEPDC1BQ8WUY9 529 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 MOCOSQ96EN8 888 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 CCT7Q99832 543 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 IMPG2Q9BZV3 1241 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 TJP2Q9UDY2 1190 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 BLOC1S6Q9UL45 172 aa14.29□□□□□ -0.12
SDC1-202ENST00000381150 VILLO15195 856 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 KCNN4O15554 427 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 TFAP2AP05549 437 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 SAT1P21673 171 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 CRADDP78560 199 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 CAPSQ13938 189 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms