RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 M0QYT0 321 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 TRDMT1O14717 391 aaKnown RBP23.92■■□□□ 1.42
VPS16-201ENST00000380443 INPPL1O15357 1258 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 STK10O94804 968 aaKnown RBP23.92■■□□□ 1.42
VPS16-201ENST00000380443 F9P00740 461 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 FDFT1P37268 417 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 ELK3P41970 407 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 IFNAR2P48551 515 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 SARNPP82979 210 aaKnown RBP23.92■■□□□ 1.42
VPS16-201ENST00000380443 PPARDQ03181 441 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 SCAPQ12770 1279 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 MPP2Q14168 576 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 MAPRE1Q15691 268 aaKnown RBP23.92■■□□□ 1.42
VPS16-201ENST00000380443 HEATR6Q6AI08 1181 aaKnown RBP23.92■■□□□ 1.42
VPS16-201ENST00000380443 KCNT2Q6UVM3 1135 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 PDZD4Q76G19 769 aaPredicted RBP23.92■■□□□ 1.42
VPS16-201ENST00000380443 FAM131BQ86XD5 332 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 SLAIN1Q8ND83 568 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 GRAMD1AQ96CP6 724 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 PCED1BQ96HM7 432 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 SMOQ99835 787 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 DTLQ9NZJ0 730 aa23.92■■□□□ 1.42
VPS16-201ENST00000380443 CAPN9O14815 690 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 HCAR3P49019 387 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 GBE1Q04446 702 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 TUSC3Q13454 348 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 LPIN1Q14693 890 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 OTUD1Q5VV17 481 aaPredicted RBP23.91■■□□□ 1.42
VPS16-201ENST00000380443 MGARPQ8TDB4 240 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 WDR83Q9BRX9 315 aaKnown RBP23.91■■□□□ 1.42
VPS16-201ENST00000380443 ULBP1Q9BZM6 244 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 ACTR5Q9H9F9 607 aaPredicted RBP23.91■■□□□ 1.42
VPS16-201ENST00000380443 XAB2Q9HCS7 855 aaKnown RBP23.91■■□□□ 1.42
VPS16-201ENST00000380443 MYBPHLA2RUH7 354 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 M0QZQ0 153 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 BANF1O75531 89 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 GOT1P17174 413 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 AMPD1P23109 780 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 SLC10A2Q12908 348 aaPredicted RBP23.91■■□□□ 1.42
VPS16-201ENST00000380443 SPARCL1Q14515 664 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 PAFAH1B3Q15102 231 aaKnown RBP23.91■■□□□ 1.42
VPS16-201ENST00000380443 PDK1Q15118 436 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 TIGD5Q53EQ6 642 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 FAM171BQ6P995 826 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 RNF180Q86T96 592 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 TAX1BP1Q86VP1 789 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 PXYLP1Q8TE99 480 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 DENND1AQ8TEH3 1009 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 RNF139Q8WU17 664 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 PAFAH2Q99487 392 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 KDM4CQ9H3R0 1056 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 ETNK1Q9HBU6 452 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 ARHGEF4Q9NR80 690 aa23.91■■□□□ 1.42
VPS16-201ENST00000380443 PRKAR2AP13861 404 aaKnown RBP23.9■■□□□ 1.42
VPS16-201ENST00000380443 GRK4P32298 578 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 NDUFV1P49821 464 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 SEMA5AQ13591 1074 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 LRRC14Q15048 493 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 ARL13BQ3SXY8 428 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 RGS9BPQ6ZS82 235 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 BEND5Q7L4P6 421 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 C3orf58Q8NDZ4 430 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 HTR3CQ8WXA8 447 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 APBB2Q92870 758 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 RASSF4Q9H2L5 321 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 CHMP2BQ9UQN3 213 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 NOD1Q9Y239 953 aa23.9■■□□□ 1.42
VPS16-201ENST00000380443 IQANK1A0A1B0GTG1 560 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 CASTOR2A6NHX0 329 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 TCP11X1B4DZS4 312 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 ZWINTO95229 277 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 GHRP10912 638 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 CCND3P30281 292 aaPredicted RBP23.89■■□□□ 1.42
VPS16-201ENST00000380443 ADRA1BP35368 520 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 GLUD2P49448 558 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 AFF1P51825 1210 aaKnown RBP23.89■■□□□ 1.42
VPS16-201ENST00000380443 TRIM32Q13049 653 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 TRIM71Q2Q1W2 868 aaKnown RBP23.89■■□□□ 1.42
VPS16-201ENST00000380443 RNF187Q5TA31 235 aaPredicted RBP23.89■■□□□ 1.42
VPS16-201ENST00000380443 DCLRE1AQ6PJP8 1040 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 CAPN12Q6ZSI9 719 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 THEM5Q8N1Q8 247 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 TAB3Q8N5C8 712 aaPredicted RBP23.89■■□□□ 1.42
VPS16-201ENST00000380443 TMEM51Q9NW97 253 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 IKBKGQ9Y6K9 419 aa23.89■■□□□ 1.42
VPS16-201ENST00000380443 HTTP42858 3142 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 A0A0A0MRY4 1105 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 PPP1R12AO14974 1030 aaPredicted RBP23.89■■□□□ 1.41
VPS16-201ENST00000380443 MGEA5O60502 916 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 FSBPO95073 299 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 ASMTLO95671 621 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 LTFP02788 710 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 MLNP12872 115 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 TYMPP19971 482 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 MAGEA3P43357 314 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 ITGA7Q13683 1181 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 LACTB2Q53H82 288 aaPredicted RBP23.89■■□□□ 1.41
VPS16-201ENST00000380443 INTS6LQ5JSJ4 861 aaKnown RBP23.89■■□□□ 1.41
VPS16-201ENST00000380443 ZMIZ2Q8NF64 920 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 CCDC110Q8TBZ0 833 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms