RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 OSBPL11Q9BXB4 747 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 NUF2Q9BZD4 464 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 NIF3L1Q9GZT8 377 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 C12orf65Q9H3J6 166 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 TMEM134Q9H6X4 195 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 APOBEC3GQ9HC16 384 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 PCDHB12Q9Y5F1 795 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 PCDHA10Q9Y5I2 948 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 UBR3Q6ZT12 1888 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 DOCK5Q9H7D0 1870 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 RGSL1A5PLK6 1076 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 TMEM221A6NGB7 291 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 C2orf71A6NGG8 1288 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 BMP10O95393 424 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 TRUB2O95900 331 aaKnown RBP8.46□□□□□ -1.05
PTPRR-203ENST00000378778 APOA4P06727 396 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 CDH2P19022 906 aaPredicted RBP8.46□□□□□ -1.05
PTPRR-203ENST00000378778 PTGER2P43116 358 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 RBM5P52756 815 aaKnown RBP eCLIP8.46□□□□□ -1.05
PTPRR-203ENST00000378778 ABCE1P61221 599 aaKnown RBP8.46□□□□□ -1.05
PTPRR-203ENST00000378778 MYLK3Q32MK0 819 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 PDCD4Q53EL6 469 aaKnown RBP8.46□□□□□ -1.05
PTPRR-203ENST00000378778 EPGNQ6UW88 154 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 HACE1Q8IYU2 909 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 ISL2Q96A47 359 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 AGBL1Q96MI9 1066 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 TBCBQ99426 244 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 RBAKQ9NYW8 714 aaPredicted RBP8.46□□□□□ -1.05
PTPRR-203ENST00000378778 MOCS1Q9NZB8 636 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 RIMS3Q9UJD0 308 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 CEPT1Q9Y6K0 416 aa8.46□□□□□ -1.05
PTPRR-203ENST00000378778 PRSS51A0A1B0GVH4 220 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 FAM170AA1A519 330 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 SLC15A5A6NIM6 579 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 TRIM64CA6NLI5 447 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 ZNF195O14628 629 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 ADCY3O60266 1144 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 GCATO75600 419 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 TOM1L1O75674 476 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 CAPN15O75808 1086 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 TCF4P15884 667 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 ZNF12P17014 697 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 EPHB1P54762 984 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 GAD2Q05329 585 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 KLF10Q13118 480 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 MTA1Q13330 715 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 BNC2Q6ZN30 1099 aaPredicted RBP8.46□□□□□ -1.06
PTPRR-203ENST00000378778 ZFPM1Q8IX07 1006 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 UNC5BQ8IZJ1 945 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 CCDC24Q8N4L8 307 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 SMYD1Q8NB12 490 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 KYQ8NBH2 561 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 CFAP36Q96G28 342 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 SMYD3Q9H7B4 428 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 GPRC5CQ9NQ84 441 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 IGSF9Q9P2J2 1179 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 EPS15L1Q9UBC2 864 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 CDH7Q9ULB5 785 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 NUB1Q9Y5A7 615 aa8.46□□□□□ -1.06
PTPRR-203ENST00000378778 SMCHD1A6NHR9 2005 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 KPNA7A9QM74 516 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 TADA2AO75478 443 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 BCAS2O75934 225 aaPredicted RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 PSAPP07602 524 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 SPATA31D3P0C874 917 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 YBX3P16989 372 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 PSMC3P17980 439 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 NAMPTP43490 491 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 PSMD8P48556 350 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 SCNN1DP51172 638 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 MYBPC1Q00872 1141 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 PDAP1Q13442 181 aaKnown RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 BOLA3Q53S33 107 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 GPAT2Q6NUI2 795 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 TSHZ1Q6ZSZ6 1077 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 SPATA31D4Q6ZUB0 917 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 PATL1Q86TB9 770 aaKnown RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 BRSK2Q8IWQ3 736 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 COLGALT2Q8IYK4 626 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 ADGRF2Q8IZF7 708 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 PGAM4Q8N0Y7 254 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 TTC39CQ8N584 583 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 SLC25A41Q8N5S1 370 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CNTD1Q8N815 330 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 RDH11Q8TC12 318 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 ADAMTS16Q8TE57 1224 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 AFG1LQ8WV93 481 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 TFB1MQ8WVM0 346 aaKnown RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 BSNDQ8WZ55 320 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 MCRS1Q96EZ8 462 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CDHR1Q96JP9 859 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 GCNAQ96QF7 691 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 MPHOSPH6Q99547 160 aaKnown RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 EBF4Q9BQW3 602 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 MECRQ9BV79 373 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 APOL6Q9BWW8 343 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 MRPL1Q9BYD6 325 aaKnown RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 OSBPL6Q9BZF3 934 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 EIF2B3Q9NR50 452 aaKnown RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 RAB6BQ9NRW1 208 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms