RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 GOLGA8NF8WBI6 632 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 RNF103O00237 685 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 DDX3YO15523 660 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 ENDOD1O94919 500 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 SYF2O95926 243 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 EDNRBP24530 442 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 GRIK3Q13003 919 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 TARBP2Q15633 366 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 TTC39BQ5VTQ0 682 aaPredicted RBP14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 SERPINB11Q96P15 392 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 PPP1R2P1Q96PQ5 205 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 TSSK1BQ9BXA7 367 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 AAR2Q9Y312 384 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 ANKRD36CQ5JPF3 1778 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 SLX4Q8IY92 1834 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 hCG_2014768A0A024R1R8 64 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 hCG_1818297A0A087WSY0 165 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 TCRBV7S2A1N4TA0A589 114 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 SNX2O60749 519 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 NR2C2P49116 596 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 GEMP55040 296 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 DUPD1Q68J44 220 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 DCLRE1AQ6PJP8 1040 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 FAM35AQ86V20 835 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 EIF1ADQ8N9N8 165 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 DUSP16Q9BY84 665 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 LRRC40Q9H9A6 602 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 NINJ2Q9NZG7 142 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 FAM8A1Q9UBU6 413 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 ARL2BPQ9Y2Y0 163 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 FAM107AO95990 144 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 CHEK2O96017 543 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 STX3Q13277 289 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 DPYSL3Q14195 570 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 SDHAF4Q5VUM1 108 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 PMF1Q6P1K2 205 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 FRA10AC1Q70Z53 315 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 BLOC1S5Q8TDH9 187 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 FAM111AQ96PZ2 611 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 TASP1Q9H6P5 420 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 NPHS2Q9NP85 383 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 NT5MQ9NPB1 228 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 NDFIP2Q9NV92 336 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 L3MBTL1Q9Y468 752 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 SLC30A1Q9Y6M5 507 aa14.62□□□□□ -0.07
SHROOM1-203ENST00000378679 GYG2O15488 501 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 ENPEPQ07075 957 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 MAP3K21Q5TCX8 1036 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 HIPK4Q8NE63 616 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 ARMC2Q8NEN0 867 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 FIZ1Q96SL8 496 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 LRCH4O75427 683 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 NDUFS3O75489 264 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 MATKP42679 507 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 TPD52P55327 224 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 IFI35P80217 286 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 SLC24A5Q71RS6 500 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 LONP2Q86WA8 852 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 CCNJLQ8IV13 435 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 LRRN4Q8WUT4 740 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 OSBPL1AQ9BXW6 950 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 GRID1Q9ULK0 1009 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 VANGL2Q9ULK5 521 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 USP15Q9Y4E8 981 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 PCDHB12Q9Y5F1 795 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 USP12O75317 370 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 CYP1A1P04798 512 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 EPHB3P54753 998 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 DRG2P55039 364 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 MRPS5P82675 430 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 ANKRD20A8PQ5CZ79 823 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 RABGAP1LQ5R372 815 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 TMCO4Q5TGY1 634 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 TIGD7Q6NT04 549 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 ELMO2Q96JJ3 720 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 SNX27Q96L92 541 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 CINPQ9BW66 212 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 TRMT13Q9NUP7 481 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 MARCH2Q9P0N8 246 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 R3HDM2Q9Y2K5 976 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 PTCH2Q9Y6C5 1203 aa14.61□□□□□ -0.07
SHROOM1-203ENST00000378679 PRRC2BQ5JSZ5 2229 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 RPL22P35268 128 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 CASP2P42575 452 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 TUFMP49411 452 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 CLCNKBP51801 687 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 ART3Q13508 389 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 SLC26A11Q86WA9 606 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 XYLT1Q86Y38 959 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 PWWP2AQ96N64 755 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 TSC22D3Q99576 134 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 NRDE2Q9H7Z3 1164 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 ABCC13Q9NSE7 274 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 PCDHGC3Q9UN70 934 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 NR2E1Q9Y466 385 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 NHSQ6T4R5 1651 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 TTLL13PA6NNM8 815 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 TPH1P17752 444 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms