RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 E2F6O75461 281 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 SUPT3HO75486 399 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 RHOBTB1O94844 696 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 AXLP30530 894 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 ITIH4Q14624 930 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 ASTE1Q2TB18 679 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 DNAL1Q4LDG9 190 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 PTRHD1Q6GMV3 140 aaKnown RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 BBS12Q6ZW61 710 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 ZFP42Q96MM3 310 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 DDX50Q9BQ39 737 aaKnown RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 MRPL45Q9BRJ2 306 aaKnown RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 TRIM4Q9C037 500 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 YIPF3Q9GZM5 350 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 TUBGCP4Q9UGJ1 667 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 SH3BP1Q9Y3L3 701 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 TRPV2Q9Y5S1 764 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.57□□□□□ -0.24
NPHP4-203ENST00000378169 TIMM44O43615 452 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 HNRNPCL1O60812 293 aaKnown RBP13.57□□□□□ -0.24
NPHP4-203ENST00000378169 KLHL2O95198 593 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 RALBP11234 206 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 NPR3P17342 541 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 MAP2K5Q13163 448 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 ZNF177Q13360 481 aaPredicted RBP13.57□□□□□ -0.24
NPHP4-203ENST00000378169 KRT33BQ14525 404 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 THEMIS2Q5TEJ8 643 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 ZNF280DQ6N043 979 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 UNC45BQ8IWX7 931 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 SNX19Q92543 992 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 CMTM5Q96DZ9 223 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 LGMNQ99538 433 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 CINPQ9BW66 212 aaPredicted RBP13.57□□□□□ -0.24
NPHP4-203ENST00000378169 ANGPT2O15123 496 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 AVILO75366 819 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 VAPBO95292 243 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 TRUB2O95900 331 aaKnown RBP13.57□□□□□ -0.24
NPHP4-203ENST00000378169 STMN1P16949 149 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 RPA3P35244 121 aaPredicted RBP13.57□□□□□ -0.24
NPHP4-203ENST00000378169 HOXD13P35453 343 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 DUSP28Q4G0W2 176 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 SLC39A12Q504Y0 691 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 UNC93AQ86WB7 457 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 SOCS4Q8WXH5 440 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 WNT8BQ93098 351 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 PRDM12Q9H4Q4 367 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 NSMCE4AQ9NXX6 385 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 DSEQ9UL01 958 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 FARP1Q9Y4F1 1045 aaPredicted RBP13.57□□□□□ -0.24
NPHP4-203ENST00000378169 ADGRA3Q8IWK6 1321 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 C5P01031 1676 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 E9PBE3 544 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 CBX4O00257 560 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 KLHL41O60662 606 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 NQO1P15559 274 aaKnown RBP13.57□□□□□ -0.24
NPHP4-203ENST00000378169 GOT1P17174 413 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 HMOX2P30519 316 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 NOS2P35228 1153 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 SCNN1BP51168 640 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 SP2Q02086 613 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 TRIP10Q15642 601 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 N4BP2L1Q5TBK1 243 aaPredicted RBP13.57□□□□□ -0.24
NPHP4-203ENST00000378169 C16orf46Q6P387 395 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 ILDR2Q71H61 639 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 RASGEF1CQ8N431 466 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 ALLCQ8N6M5 410 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 ICA1LQ8NDH6 482 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 RFWD2Q8NHY2 731 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 ART4Q93070 314 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 APOL5Q9BWW9 433 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 TMEM120AQ9BXJ8 343 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 TRIM54Q9BYV2 358 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 CACYBPQ9HB71 228 aaKnown RBP13.57□□□□□ -0.24
NPHP4-203ENST00000378169 OR12D3Q9UGF7 316 aa13.57□□□□□ -0.24
NPHP4-203ENST00000378169 NOCTQ9UK39 431 aaKnown RBP13.57□□□□□ -0.24
NPHP4-203ENST00000378169 B4GALT4O60513 344 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 CPA3P15088 417 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 CHRNB2P17787 502 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 ESRRGP62508 458 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 CSHL1Q14406 222 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 SPDYAQ5MJ70 313 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 MARC1Q5VT66 337 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 TTC27Q6P3X3 843 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 EXOC3L1Q86VI1 746 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 ANKRD52Q8NB46 1076 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 TFAP2BQ92481 460 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 NIFKQ9BYG3 293 aaKnown RBP13.56□□□□□ -0.24
NPHP4-203ENST00000378169 CD274Q9NZQ7 290 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 ST3GAL5Q9UNP4 418 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 ACOT9Q9Y305 439 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 KPNA6O60684 536 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 ERBB2P04626 1255 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 SGO1Q5FBB7 561 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 ST13P4Q8IZP2 240 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-203ENST00000378169 ZC3H15Q8WU90 426 aaKnown RBP13.56□□□□□ -0.24
NPHP4-203ENST00000378169 TMEM237Q96Q45 408 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 NTPCRQ9BSD7 190 aaKnown RBP13.56□□□□□ -0.24
NPHP4-203ENST00000378169 MRPL1Q9BYD6 325 aaKnown RBP13.56□□□□□ -0.24
NPHP4-203ENST00000378169 ETNK2Q9NVF9 386 aa13.56□□□□□ -0.24
NPHP4-203ENST00000378169 ARMCX1Q9P291 453 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms