RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 DUX4L3P0CJ86 424 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 DUX4L4P0CJ87 422 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 DUX4L5P0CJ88 424 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 DUX4L6P0CJ89 424 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 DUX4L7P0CJ90 424 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 ETS1P14921 441 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 FECHP22830 423 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 DGKZQ13574 1117 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 UGCGQ16739 394 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 SPDYCQ5MJ68 293 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 SPDYAQ5MJ70 313 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 C6orf10Q5SRN2 563 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 PLD3Q8IV08 490 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 PCYOX1LQ8NBM8 494 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 ZSWIM2Q8NEG5 633 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 DUX4Q9UBX2 424 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 SUPT3HB4E1H0 165 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 HLA-DPA1P20036 260 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 DEFB128Q7Z7B8 93 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 TCP10LQ8TDR4 215 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 APOL2Q9BQE5 337 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 RUBCNLQ9H714 662 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 CNTNAP2Q9UHC6 1331 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 SEC24DO94855 1032 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-201ENST00000378156 CCR1P32246 355 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 KATNAL2Q8IYT4 538 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 SGF29Q96ES7 293 aa15.45■□□□□ 0.06
NPHP4-201ENST00000378156 TRIM45Q9H8W5 580 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-201ENST00000378156 C2orf81A6NN90 581 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 DGKIO75912 1065 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 FSBPO95073 299 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 MAMLD1Q13495 774 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 POLD3Q15054 466 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-201ENST00000378156 MTFR1Q15390 333 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 PLPPR4Q7Z2D5 763 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 SHISA4Q96DD7 197 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 GAD1Q99259 594 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 ERVK-5Q9HDB9 667 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 CRLS1Q9UJA2 301 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 PCDHB5Q9Y5E4 795 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 AKAP10O43572 662 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 TMEM120AQ9BXJ8 343 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 LMO7Q8WWI1 1683 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 SLC15A5A6NIM6 579 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 TIMM44O43615 452 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 SERPINB1P30740 379 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 CNGA2Q16280 664 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 KIAA0319LQ8IZA0 1049 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 FUKQ8N0W3 1084 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 M0R3G1 203 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 APOA4P06727 396 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 TCN1P20061 433 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-201ENST00000378156 DRG2P55039 364 aaKnown RBP15.44■□□□□ 0.06
NPHP4-201ENST00000378156 AQP5P55064 265 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 CAPSQ13938 189 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 CXCL17Q6UXB2 119 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 SLC51AQ86UW1 340 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 ZCCHC9Q8N567 271 aaKnown RBP15.44■□□□□ 0.06
NPHP4-201ENST00000378156 PRPF18Q99633 342 aaKnown RBP15.44■□□□□ 0.06
NPHP4-201ENST00000378156 FBXO44Q9H4M3 255 aa15.44■□□□□ 0.06
NPHP4-201ENST00000378156 HMX1Q9NP08 348 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-201ENST00000378156 CHKAP35790 457 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 OXCT1P55809 520 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 STX19Q8N4C7 294 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 SMARCD1Q96GM5 515 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 TMEM237Q96Q45 408 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 PCDHB18PQ96TA0 734 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 COPG1Q9Y678 874 aaKnown RBP15.43■□□□□ 0.06
NPHP4-201ENST00000378156 TBC1D4O60343 1298 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 GLRA3O75311 464 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 WDR47O94967 919 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 WLSQ5T9L3 541 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 PALB2Q86YC2 1186 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 PQBP1O60828 265 aaKnown RBP15.43■□□□□ 0.06
NPHP4-201ENST00000378156 SERPINI2O75830 405 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 MIPP30301 263 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 SLC6A3Q01959 620 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 ACAP1Q15027 740 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 TMC7Q7Z402 723 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 DEFB106AQ8N104 65 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 COLGALT1Q8NBJ5 622 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 DMAP1Q9NPF5 467 aaPredicted RBP15.43■□□□□ 0.06
NPHP4-201ENST00000378156 UBTFL6P0CB48 400 aaPredicted RBP15.43■□□□□ 0.06
NPHP4-201ENST00000378156 SLC35G1Q2M3R5 365 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 FAM171A1Q5VUB5 890 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 ADAM2Q99965 735 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 LRRC19Q9H756 370 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 ZMYM2Q9UBW7 1377 aa15.43■□□□□ 0.06
NPHP4-201ENST00000378156 TBKBP1A7MCY6 615 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 YDJCA8MPS7 323 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 E5RJQ4 531 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 KPNA1P52294 538 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-201ENST00000378156 RTP1P59025 263 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 PTK2BQ14289 1009 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 PRAMEF19Q5SWL8 479 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 AGAP9Q5VTM2 703 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 HS6ST3Q8IZP7 471 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 LZICQ8WZA0 190 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 SEMA4DQ92854 862 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 KREMEN1Q96MU8 473 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms