RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ESRRAP11474 423 aaPredicted RBP11.3□□□□□ -0.6
BEST1-201ENST00000378043 CCDC130P13994 396 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 VAV1P15498 845 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 AMPD1P23109 780 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 CRHR1P34998 444 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 ADCYAP1R1P41586 468 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 SEMA5AQ13591 1074 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 BLMHQ13867 455 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 KPNB1Q14974 876 aaKnown RBP11.3□□□□□ -0.6
BEST1-201ENST00000378043 KIZQ2M2Z5 673 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 NCBP2-AS2Q69YL0 99 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 QKIQ96PU8 341 aaKnown RBP eCLIP11.3□□□□□ -0.6
BEST1-201ENST00000378043 EIF2AQ9BY44 585 aaKnown RBP11.3□□□□□ -0.6
BEST1-201ENST00000378043 SLC17A6Q9P2U8 582 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 PCDHA11Q9Y5I1 949 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 COL1A2P08123 1366 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 CYP2C8P10632 490 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 LMO2P25791 158 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 NR2C2P49116 596 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 CRADDP78560 199 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 PPIL2Q13356 520 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 NBPF20Q3BBV1 942 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 ARHGAP17Q68EM7 881 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 C4orf22Q6V702 233 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 ZDHHC17Q8IUH5 632 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 NUDCD3Q8IVD9 361 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 NETO2Q8NC67 525 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 OR6B3Q8NGW1 331 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 KBTBD7Q8WVZ9 684 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 APBB2Q92870 758 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 OPTNQ96CV9 577 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 MTBPQ96DY7 904 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 SNX27Q96L92 541 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 OLFM3Q96PB7 478 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 LBHD1Q9BQE6 289 aaPredicted RBP11.29□□□□□ -0.6
BEST1-201ENST00000378043 FAM167BQ9BTA0 163 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 KATNBL1Q9H079 304 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 ADARB2Q9NS39 739 aaKnown RBP11.29□□□□□ -0.6
BEST1-201ENST00000378043 MARCOQ9UEW3 520 aaPredicted RBP11.29□□□□□ -0.6
BEST1-201ENST00000378043 BRCA2P51587 3418 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 F5H423 210 aaPredicted RBP11.29□□□□□ -0.6
BEST1-201ENST00000378043 SMNDC1O75940 238 aaKnown RBP eCLIP11.29□□□□□ -0.6
BEST1-201ENST00000378043 KRT36O76013 467 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 BPGMP07738 259 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 PDGFRBP09619 1106 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 GOT1P17174 413 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 PAX7P23759 505 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 CPA2P48052 419 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 RPL34P49207 117 aaKnown RBP11.29□□□□□ -0.6
BEST1-201ENST00000378043 TMEM62Q0P6H9 643 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 GRIK4Q16099 956 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 ZNF792Q3KQV3 632 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 ZCCHC23Q6ZST2 131 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 STKLD1Q8NE28 680 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 NRG4Q8WWG1 115 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 LGMNQ99538 433 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 CDHR5Q9HBB8 845 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 PLXNB2O15031 1838 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 A6NJR5 290 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 EIF4E1BA6NMX2 242 aaKnown RBP11.29□□□□□ -0.6
BEST1-201ENST00000378043 A8MXQ7 604 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 I3L4J1 428 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 SKAP2O75563 359 aaPredicted RBP11.29□□□□□ -0.6
BEST1-201ENST00000378043 DGKIO75912 1065 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 ALDH1A2O94788 518 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 KITP10721 976 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 LCP1P13796 627 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 ZNF618Q5T7W0 954 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 ATG16L1Q676U5 607 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 TRIM68Q6AZZ1 485 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 ANO7Q6IWH7 933 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 ALKAL1Q6UXT8 129 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 TIFABQ6ZNK6 161 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 DENND5BQ6ZUT9 1274 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 UNC93AQ86WB7 457 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 ANKRD52Q8NB46 1076 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 EMID1Q96A84 441 aaPredicted RBP11.29□□□□□ -0.6
BEST1-201ENST00000378043 MMADHCQ9H3L0 296 aaPredicted RBP11.29□□□□□ -0.6
BEST1-201ENST00000378043 PLEKHA5Q9HAU0 1116 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 XAB2Q9HCS7 855 aaKnown RBP11.29□□□□□ -0.6
BEST1-201ENST00000378043 PIH1D1Q9NWS0 290 aaKnown RBP11.29□□□□□ -0.6
BEST1-201ENST00000378043 EMCNQ9ULC0 261 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 GINS2Q9Y248 185 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 DERAQ9Y315 318 aa11.29□□□□□ -0.6
BEST1-201ENST00000378043 RBM47A0AV96 593 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 WDR27A2RRH5 827 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 SPTLC1O15269 473 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 TBX10O75333 385 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 ALDOAP04075 364 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 ATP6V1C1P21283 382 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 ADORA2BP29275 332 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 GCKP35557 465 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 GJA5P36382 358 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 AQP5P55064 265 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 RCN1Q15293 331 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 C9orf57Q5W0N0 161 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 STEAP4Q687X5 459 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 HEATR6Q6AI08 1181 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 CYS1Q717R9 158 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms