RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 HSP90AA5PQ58FG0 334 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 RAP1GAP2Q684P5 730 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 COLGALT1Q8NBJ5 622 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 OR52K1Q8NGK4 314 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 CDC26Q8NHZ8 85 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 PPM1EQ8WY54 764 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 TMEM39AQ9NV64 488 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 SLC39A10Q9ULF5 831 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 PTCH2Q9Y6C5 1203 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 CDY1Q9Y6F8 540 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 TRUB2O95900 331 aaKnown RBP8.38□□□□□ -1.07
CKAP2-203ENST00000378037 MT-CYBP00156 380 aaPredicted RBP8.38□□□□□ -1.07
CKAP2-203ENST00000378037 PRKCGP05129 697 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 PYGBP11216 843 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 RAG1P15918 1043 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 KCNA4P22459 653 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 PCSK1P29120 753 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 LMNB2Q03252 620 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 PLD1Q13393 1074 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 PPP2R5EQ16537 467 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 MARCH8Q5T0T0 291 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 C6orf118Q5T5N4 469 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 GPRIN1Q7Z2K8 1008 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 CCDC197Q8NCU1 140 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 C3orf58Q8NDZ4 430 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF473Q8WTR7 871 aaKnown RBP8.38□□□□□ -1.07
CKAP2-203ENST00000378037 TMEM169Q96HH4 297 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 PEBP4Q96S96 227 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 PPARGC1AQ9UBK2 798 aaKnown RBP8.38□□□□□ -1.07
CKAP2-203ENST00000378037 OR12D3Q9UGF7 316 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 RNF103O00237 685 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CLGNO14967 610 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 B4GALT4O60513 344 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 DIAPH2O60879 1101 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 EZRP15311 586 aaKnown RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 NPR3P17342 541 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 EDNRBP24530 442 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ADRA1DP25100 572 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 GPD2P43304 727 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 SCNN1BP51168 640 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CACNA2D1P54289 1103 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 NME5P56597 212 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 NOGQ13253 232 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CNGA2Q16280 664 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 QPCTQ16769 361 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 TAF2Q6P1X5 1199 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 LINGO4Q6UY18 593 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 OTOP3Q7RTS5 596 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 PTAR1Q7Z6K3 402 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 EXD1Q8NHP7 514 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CALR3Q96L12 384 aaKnown RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 FBXL18Q96ME1 805 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CAB39LQ9H9S4 337 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 UBN1Q9NPG3 1134 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 GDF3Q9NR23 364 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CHST12Q9NRB3 414 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CREBZFQ9NS37 354 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 C20orf96Q9NUD7 363 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 GOLGA8QA0A0J9YX86 632 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 GOLGA8OA6NCC3 632 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 GOLGA8NF8WBI6 632 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 PHGDHO43175 533 aaKnown RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 SH3BGRLO75368 114 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 BAG2O95816 211 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ODC1P11926 461 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 PRLRP16471 622 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ERCC2P18074 760 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CTGFP29279 349 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 PMLP29590 882 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 PEX5P50542 639 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 IL9RQ01113 521 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 BTG3Q14201 252 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 LRRC36Q1X8D7 754 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF677Q86XU0 584 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 EFCAB3Q8N7B9 438 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 KLHL29Q96CT2 875 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 PAFAH2Q99487 392 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 MUC3BQ9H195 1237 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 GKN1Q9NS71 199 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ARMCX1Q9P291 453 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CIDEBQ9UHD4 219 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 hCG_1818297A0A087WSY0 165 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 A0A0A6YYK5 440 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 MOXD2PA6NHM9 499 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 EIF3HO15372 352 aaKnown RBP eCLIP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 SEPT4O43236 478 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 LIASO43766 372 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 LTFP02788 710 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ALDH2P05091 517 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ZBTB48P10074 688 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ITIH2P19823 946 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CYP3A5P20815 502 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 TUBP50607 506 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ACLYP53396 1101 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 FAAP100Q0VG06 881 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CCDC14Q49A88 953 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 TTC31Q49AM3 519 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 FASTKD1Q53R41 847 aaKnown RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 FNBP1LQ5T0N5 605 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms