RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 TRIM4Q9C037 500 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 GIMAP4Q9NUV9 329 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 CYP1A2P05177 515 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 USP17L7P0C7H9 530 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 GRIK3Q13003 919 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 CCDC33Q8N5R6 958 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 ICA1LQ8NDH6 482 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 LENG9Q96B70 501 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 C12orf42Q96LP6 360 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 NMRK2Q9NPI5 230 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 CHCHD3Q9NX63 227 aaKnown RBP20.23■□□□□ 0.83
PCDH8-202ENST00000377942 SUPT7LO94864 414 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 RARAP10276 462 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 MARSP56192 900 aaKnown RBP20.23■□□□□ 0.83
PCDH8-202ENST00000377942 FOXD4Q12950 439 aaPredicted RBP20.23■□□□□ 0.83
PCDH8-202ENST00000377942 DCLRE1AQ6PJP8 1040 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 SH3BP5LQ7L8J4 393 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 SGF29Q96ES7 293 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 MARCH2Q9P0N8 246 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 RUVBL2Q9Y230 463 aaKnown RBP20.23■□□□□ 0.83
PCDH8-202ENST00000377942 SPRYD7Q5W111 196 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 DNAAF5Q86Y56 855 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 ARID3BQ8IVW6 561 aaPredicted RBP20.22■□□□□ 0.83
PCDH8-202ENST00000377942 FUT8Q9BYC5 575 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 STN1Q9H668 368 aaKnown RBP20.22■□□□□ 0.83
PCDH8-202ENST00000377942 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
PCDH8-202ENST00000377942 BTNL10A8MVZ5 291 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 BMP6P22004 513 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 ATP5C1P36542 298 aaKnown RBP20.22■□□□□ 0.83
PCDH8-202ENST00000377942 ITGA9Q13797 1035 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 CACNA1FO60840 1977 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 ADGRA2Q96PE1 1338 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 NOL9Q5SY16 702 aaKnown RBP20.22■□□□□ 0.83
PCDH8-202ENST00000377942 TRIM48Q8IWZ4 208 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 LGI2Q8N0V4 545 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 SPATA20Q8TB22 786 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 TKTL2Q9H0I9 626 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 STX18Q9P2W9 335 aaKnown RBP20.22■□□□□ 0.83
PCDH8-202ENST00000377942 NID2Q14112 1375 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 TGFB1I1O43294 461 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 GRK2P25098 689 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 ZNF143P52747 638 aaPredicted RBP20.22■□□□□ 0.83
PCDH8-202ENST00000377942 AASDHQ4L235 1098 aaPredicted RBP20.22■□□□□ 0.83
PCDH8-202ENST00000377942 PHF13Q86YI8 300 aaPredicted RBP20.22■□□□□ 0.83
PCDH8-202ENST00000377942 PARP9Q8IXQ6 854 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 B3GALNT2Q8NCR0 500 aa20.22■□□□□ 0.83
PCDH8-202ENST00000377942 RBAK-RBAKDNI3L0D1 243 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 MMP3P08254 477 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 H2AFXP16104 143 aaPredicted RBP20.21■□□□□ 0.83
PCDH8-202ENST00000377942 KCNMA1Q12791 1236 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 ELMO3Q96BJ8 720 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 RIPK3Q9Y572 518 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 SLCO1B7G3V0H7 640 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 ERBB2P04626 1255 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 KDELR1P24390 212 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 STX5Q13190 355 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 STARD3Q14849 445 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 TFAP2DQ7Z6R9 452 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 MAGEB18Q96M61 343 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 NIFKQ9BYG3 293 aaKnown RBP20.21■□□□□ 0.83
PCDH8-202ENST00000377942 GLI1P08151 1106 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 NBPF20Q3BBV1 942 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 ARSHQ5FYA8 562 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 TOP6BLQ8N6T0 577 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 SMPD4Q9NXE4 827 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 HES2Q9Y543 173 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 ERI2A8K979 691 aaKnown RBP20.21■□□□□ 0.83
PCDH8-202ENST00000377942 ENDOD1O94919 500 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 DNAJC3Q13217 504 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 GJC2Q5T442 439 aaPredicted RBP20.21■□□□□ 0.83
PCDH8-202ENST00000377942 EEF1DP3Q658K8 133 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 NLGN2Q8NFZ4 835 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 ANLNQ9NQW6 1124 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 SEPT3Q9UH03 358 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 FAM32AQ9Y421 112 aaKnown RBP20.21■□□□□ 0.83
PCDH8-202ENST00000377942 PEAK1Q9H792 1746 aa20.21■□□□□ 0.83
PCDH8-202ENST00000377942 IGSF6O95976 241 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 MAMLD1Q13495 774 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 KCNT2Q6UVM3 1135 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 EIF3LQ9Y262 564 aaKnown RBP20.2■□□□□ 0.82
PCDH8-202ENST00000377942 EVPLLA8MZ36 301 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 TM9SF1O15321 606 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 CCNE2O96020 404 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 HOXB8P17481 243 aaPredicted RBP20.2■□□□□ 0.82
PCDH8-202ENST00000377942 CDH2P19022 906 aaPredicted RBP20.2■□□□□ 0.82
PCDH8-202ENST00000377942 MZF1P28698 734 aaPredicted RBP20.2■□□□□ 0.82
PCDH8-202ENST00000377942 ERAP2Q6P179 960 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 TAGAPQ8N103 731 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 TNIP2Q8NFZ5 429 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 LRRC39Q96DD0 335 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 RBBP8Q99708 897 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 RNPEPQ9H4A4 650 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 SLC9A3R1O14745 358 aaPredicted RBP20.2■□□□□ 0.82
PCDH8-202ENST00000377942 CD52P31358 61 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 TNFSF9P41273 254 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 HSDL1Q3SXM5 330 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 SPANXN3Q5MJ09 141 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 DACT3Q96B18 629 aaPredicted RBP20.2■□□□□ 0.82
PCDH8-202ENST00000377942 FAM153AQ9UHL3 310 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 A0A0B4J269 797 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms