RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ZNF180Q9UJW8 692 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 RAB26Q9ULW5 256 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 CHKBQ9Y259 395 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 TPP1O14773 563 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 CRABP2P29373 138 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 S100A5P33763 92 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 BCAT1P54687 386 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 MAP3K10Q02779 954 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 FOLH1Q04609 750 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 SLC1A5Q15758 541 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 SNX32Q86XE0 403 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 GALNT15Q8N3T1 639 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 FBXW8Q8N3Y1 598 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 EMC1Q8N766 993 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 POU5F2Q8N7G0 328 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 RP9Q8TA86 221 aaKnown RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 HTR3CQ8WXA8 447 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 PWWP2AQ96N64 755 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 MBOAT7Q96N66 472 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 C9orf16Q9BUW7 83 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 PLGRKTQ9HBL7 147 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 VANGL2Q9ULK5 521 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 CLEC11AQ9Y240 323 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 TISP43B9A030 160 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 E5RI56 91 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 UBDO15205 165 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 PPP1R11O60927 126 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 KRT8P05787 483 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 CCDC130P13994 396 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 TFE3P19532 575 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 FASP25445 335 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 RAP1GAPP47736 663 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 DPYSQ14117 519 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 MON1BQ7L1V2 547 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 DHFR2Q86XF0 187 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 NUP93Q8N1F7 819 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 NKD2Q969F2 451 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 NDNQ99608 321 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 FHDC1Q9C0D6 1143 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 FAM49BQ9NUQ9 324 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 DMAC2Q9NW81 257 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 GPATCH2LQ9NWQ4 482 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 NOCTQ9UK39 431 aaKnown RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 CROTQ9UKG9 612 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 ACOT9Q9Y305 439 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 SPDYE16A6NNV3 312 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 DDHD2O94830 711 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 KCNA2P16389 499 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 SLC25A3Q00325 362 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 SPDYE2Q495Y8 402 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 SAMD4BQ5PRF9 694 aaKnown RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 KIAA2013Q8IYS2 634 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 BHLHE22Q8NFJ8 381 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 OSCP1Q8WVF1 389 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 SLC17A7Q9P2U7 560 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 BARX2Q9UMQ3 279 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 UBIAD1Q9Y5Z9 338 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 TCRBV7S2A1N4TA0A589 114 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 HMGCRP04035 888 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 LYNP07948 512 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 CRHR1P34998 444 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 MMP14P50281 582 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 RPL14P50914 215 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 EFCAB12Q6NXP0 572 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 OR9Q1Q8NGQ5 310 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 WDR60Q8WVS4 1066 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 CDRT15Q96T59 188 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 DDX18Q9NVP1 670 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 A0A087X1B8 175 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 VAV1P15498 845 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 SNX17Q15036 470 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 LIN52Q52LA3 116 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 BTBD8Q5XKL5 378 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 RBM44Q6ZP01 1051 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 SLC7A14Q8TBB6 771 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 USP13Q92995 863 aaPredicted RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 FAM162AQ96A26 154 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 BTBD9Q96Q07 612 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 CADM1Q9BY67 442 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 FAM49AQ9H0Q0 323 aaPredicted RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 COPG2Q9UBF2 871 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 CIDEBQ9UHD4 219 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 PLLPQ9Y342 182 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 HBS1LQ9Y450 684 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 NFIBO00712 420 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 DCXO43602 365 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 PLA2G6O60733 806 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 SLC4A1P02730 911 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 BPGMP07738 259 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 TCF7P36402 384 aaPredicted RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 UBAP2LQ14157 1087 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 CAPRIN1Q14444 709 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 DCAF6Q58WW2 860 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 TBCELQ5QJ74 424 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 RNASEH2BQ5TBB1 312 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 RNF220Q5VTB9 566 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 TDRD10Q5VZ19 366 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 DENND1BQ6P3S1 775 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 ZCCHC23Q6ZST2 131 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms