RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PMS1P54277 932 aaKnown RBP14□□□□□ -0.17
GPC6-201ENST00000377047 TGM3Q08188 693 aa14□□□□□ -0.17
GPC6-201ENST00000377047 MAP2K5Q13163 448 aa14□□□□□ -0.17
GPC6-201ENST00000377047 CYP51A1Q16850 503 aa14□□□□□ -0.17
GPC6-201ENST00000377047 CBWD3Q5JTY5 395 aa14□□□□□ -0.17
GPC6-201ENST00000377047 CBWD5Q5RIA9 395 aa14□□□□□ -0.17
GPC6-201ENST00000377047 KRT78Q8N1N4 520 aa14□□□□□ -0.17
GPC6-201ENST00000377047 FAR2Q96K12 515 aa14□□□□□ -0.17
GPC6-201ENST00000377047 PURBQ96QR8 312 aaKnown RBP14□□□□□ -0.17
GPC6-201ENST00000377047 APPL1Q9UKG1 709 aa14□□□□□ -0.17
GPC6-201ENST00000377047 A8MX80 341 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 ANKRD63C9JTQ0 380 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 NUDT2P50583 147 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 UBE3AQ05086 875 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 B3GALNT2Q8NCR0 500 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 UNKQ9C0B0 810 aaKnown RBP13.99□□□□□ -0.17
GPC6-201ENST00000377047 UTP6Q9NYH9 597 aaKnown RBP13.99□□□□□ -0.17
GPC6-201ENST00000377047 CTNNAL1Q9UBT7 734 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 CAPN6Q9Y6Q1 641 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 KPNA3O00505 521 aaPredicted RBP13.99□□□□□ -0.17
GPC6-201ENST00000377047 AMPD1P23109 780 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 SERPINB5P36952 375 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 AGGF1Q8N302 714 aaeCLIP13.99□□□□□ -0.172e-11■■□□□ 12.5
GPC6-201ENST00000377047 WDR41Q9HAD4 459 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 ERI2A8K979 691 aaKnown RBP13.99□□□□□ -0.17
GPC6-201ENST00000377047 FAM47E-STBD1D6RA91 191 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 PSMD12O00232 456 aaPredicted RBP13.99□□□□□ -0.17
GPC6-201ENST00000377047 HNRNPRO43390 633 aaKnown RBP13.99□□□□□ -0.17
GPC6-201ENST00000377047 SLC12A3P55017 1021 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 ZNF268Q14587 947 aaPredicted RBP13.99□□□□□ -0.17
GPC6-201ENST00000377047 TMEM86AQ8N2M4 240 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 MDM1Q8TC05 714 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 MAGED4Q96JG8 741 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 NAT9Q9BTE0 207 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 RPS6KB2Q9UBS0 482 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 PADI4Q9UM07 663 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 WTIPA6NIX2 430 aaPredicted RBP13.99□□□□□ -0.17
GPC6-201ENST00000377047 GOLGA8TH3BQL2 631 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 ZBTB17Q13105 803 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 MPP3Q13368 585 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 GRIK5Q16478 980 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 AHCYL2Q96HN2 611 aaKnown RBP13.99□□□□□ -0.17
GPC6-201ENST00000377047 UBXN8O00124 270 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 TRPC1P48995 793 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 CCNG1P51959 295 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 SKA1Q96BD8 255 aa13.99□□□□□ -0.17
GPC6-201ENST00000377047 CCDC85CA6NKD9 419 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 EIF3HO15372 352 aaKnown RBP eCLIP13.98□□□□□ -0.173e-8■■□□□ 13.6
GPC6-201ENST00000377047 CCNT2O60583 730 aaKnown RBP13.98□□□□□ -0.17
GPC6-201ENST00000377047 CYP2A6P11509 494 aaPredicted RBP13.98□□□□□ -0.17
GPC6-201ENST00000377047 PLOD1Q02809 727 aaPredicted RBP13.98□□□□□ -0.17
GPC6-201ENST00000377047 BOP1Q14137 746 aaKnown RBP13.98□□□□□ -0.17
GPC6-201ENST00000377047 LRRC8BQ6P9F7 803 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 GLT6D1Q7Z4J2 308 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 CNDP1Q96KN2 507 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 PORCNQ9H237 461 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 C16orf96A6NNT2 1141 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 YBX3P16989 372 aaKnown RBP eCLIP13.98□□□□□ -0.17
GPC6-201ENST00000377047 TNNI3P19429 210 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 NOGQ13253 232 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 TMEM159Q96B96 161 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 APBA2Q99767 749 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 TKTL2Q9H0I9 626 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 MROH2AA6NES4 1674 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 A0A0A6YYK5 440 aaPredicted RBP13.98□□□□□ -0.17
GPC6-201ENST00000377047 TBC1D3BA6NDS4 549 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 PRKAR2AP13861 404 aaKnown RBP13.98□□□□□ -0.17
GPC6-201ENST00000377047 CYP2A7P20853 494 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 BCL2L1Q07817 233 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 DGKZQ13574 1117 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 ACOX2Q99424 681 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 HELQQ8TDG4 1101 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 CASP10Q92851 521 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 PAFAH2Q99487 392 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 DCLK3Q9C098 648 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 ELOVL6Q9H5J4 265 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 ZDHHC6Q9H6R6 413 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 TMEM131LA2VDJ0 1609 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 ADCY6O43306 1168 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 RBP1P09455 135 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 PAEPP09466 180 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 SLC6A3Q01959 620 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 KBTBD12Q3ZCT8 623 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 CCDC149Q6ZUS6 474 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 TRPM8Q7Z2W7 1104 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 SUSD6Q92537 303 aa13.98□□□□□ -0.17
GPC6-201ENST00000377047 KRCC1Q9NPI7 259 aaPredicted RBP13.98□□□□□ -0.17
GPC6-201ENST00000377047 PIH1D1Q9NWS0 290 aaKnown RBP13.98□□□□□ -0.17
GPC6-201ENST00000377047 DEPDC1Q5TB30 811 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 WSCD1Q658N2 575 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 MAP4K3Q8IVH8 894 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 RGL4Q8IZJ4 473 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 ZSWIM2Q8NEG5 633 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 NSL1Q96IY1 281 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 CAMKK2Q96RR4 588 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 ULBP1Q9BZM6 244 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 ZCCHC2Q9C0B9 1178 aaKnown RBP13.97□□□□□ -0.17
GPC6-201ENST00000377047 ACTR8Q9H981 624 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 ACOT9Q9Y305 439 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 KRT20P35900 424 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms