RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 CREMQ03060 361 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 NFE2Q16621 373 aaPredicted RBP22.01■■□□□ 1.11
HLA-C-201ENST00000376228 SLC25A52Q3SY17 297 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 CES5AQ6NT32 575 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 BBS12Q6ZW61 710 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 CCDC105Q8IYK2 499 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 ATL2Q8NHH9 583 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 TMEM209Q96SK2 561 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 SFXN1Q9H9B4 322 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 KLHL11Q9NVR0 708 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 PCSK1NQ9UHG2 260 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 DENND4AQ7Z401 1863 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 OR6C75A6NL08 312 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 BDNFP23560 247 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 ATP11AP98196 1134 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 RSPO2Q6UXX9 243 aaPredicted RBP22.01■■□□□ 1.11
HLA-C-201ENST00000376228 BEND5Q7L4P6 421 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 GPR65Q8IYL9 337 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 DEFB106AQ8N104 65 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 TTC13Q8NBP0 860 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 KCTD6Q8NC69 237 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 C1orf54Q8WWF1 131 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 NPY6RQ99463 290 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 ULBP1Q9BZM6 244 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 FAM129AQ9BZQ8 928 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 VIPAS39Q9H9C1 493 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 POPDC2Q9HBU9 364 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 RRN3Q9NYV6 651 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 DRG1Q9Y295 367 aaKnown RBP22.01■■□□□ 1.11
HLA-C-201ENST00000376228 USP3Q9Y6I4 520 aa22.01■■□□□ 1.11
HLA-C-201ENST00000376228 RFPL2O75678 378 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 ECEL1O95672 775 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 KRT10P13645 584 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 LMNB2Q03252 620 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 CDO1Q16878 200 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 SMTNL2Q2TAL5 461 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 KCNT1Q5JUK3 1230 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 VARS2Q5ST30 1063 aaKnown RBP22■■□□□ 1.11
HLA-C-201ENST00000376228 SPATA2LQ8IUW3 424 aaPredicted RBP22■■□□□ 1.11
HLA-C-201ENST00000376228 PSTKQ8IV42 348 aaKnown RBP22■■□□□ 1.11
HLA-C-201ENST00000376228 MAP7D3Q8IWC1 876 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 HINFPQ9BQA5 517 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 POMKQ9H5K3 350 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 STAP1Q9ULZ2 295 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 NFU1Q9UMS0 254 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 R3HDM2Q9Y2K5 976 aaKnown RBP22■■□□□ 1.11
HLA-C-201ENST00000376228 CDY1Q9Y6F8 540 aa22■■□□□ 1.11
HLA-C-201ENST00000376228 ESYT3A0FGR9 886 aa21.99■■□□□ 1.11
HLA-C-201ENST00000376228 ZBED1O96006 694 aa21.99■■□□□ 1.11
HLA-C-201ENST00000376228 ECHS1P30084 290 aa21.99■■□□□ 1.11
HLA-C-201ENST00000376228 OR1D2P34982 312 aa21.99■■□□□ 1.11
HLA-C-201ENST00000376228 ADCY2Q08462 1091 aa21.99■■□□□ 1.11
HLA-C-201ENST00000376228 CASP8Q14790 479 aa21.99■■□□□ 1.11
HLA-C-201ENST00000376228 GPRIN1Q7Z2K8 1008 aa21.99■■□□□ 1.11
HLA-C-201ENST00000376228 IFT81Q8WYA0 676 aa21.99■■□□□ 1.11
HLA-C-201ENST00000376228 NKD2Q969F2 451 aaPredicted RBP21.99■■□□□ 1.11
HLA-C-201ENST00000376228 FAM149B1Q96BN6 582 aa21.99■■□□□ 1.11
HLA-C-201ENST00000376228 TRIM51Q9BSJ1 452 aa21.99■■□□□ 1.11
HLA-C-201ENST00000376228 PHF7Q9BWX1 381 aaPredicted RBP21.99■■□□□ 1.11
HLA-C-201ENST00000376228 MTRRQ9UBK8 725 aa21.99■■□□□ 1.11
HLA-C-201ENST00000376228 C19orf67A6NJJ6 358 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 TBC1D4O60343 1298 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 SASH3O75995 380 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 MAGEA11P43364 429 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 SMARCB1Q12824 385 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 LLGL1Q15334 1064 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 RAB6CQ53S08 254 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 ERMARDQ5T6L9 678 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 ZNF280DQ6N043 979 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 LILRA6Q6PI73 481 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 VSTM1Q6UX27 236 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 BHLHA9Q7RTU4 235 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 MREGQ8N565 214 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 ACSF2Q96CM8 615 aaPredicted RBP21.98■■□□□ 1.11
HLA-C-201ENST00000376228 PGAP3Q96FM1 320 aaPredicted RBP21.98■■□□□ 1.11
HLA-C-201ENST00000376228 TRIM62Q9BVG3 475 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 RAB6CQ9H0N0 254 aa21.98■■□□□ 1.11
HLA-C-201ENST00000376228 DAPK3O43293 454 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 LIASO43766 372 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 GAS8O95995 478 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 FYNP06241 537 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 KCNJ1P48048 391 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 CDH6P55285 790 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 PTK6Q13882 451 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 TRADDQ15628 312 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 DPYSL2Q16555 572 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 KAZNQ674X7 775 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 ANKS3Q6ZW76 656 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 GSPT2Q8IYD1 628 aaKnown RBP21.97■■□□□ 1.11
HLA-C-201ENST00000376228 KREMEN2Q8NCW0 462 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 ATG4AQ8WYN0 398 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 HSPH1Q92598 858 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 FAF2Q96CS3 445 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 SNRNP25Q9BV90 132 aaKnown RBP21.97■■□□□ 1.11
HLA-C-201ENST00000376228 ADAM33Q9BZ11 813 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 PLEKHA4Q9H4M7 779 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.97■■□□□ 1.11
HLA-C-201ENST00000376228 NEU2Q9Y3R4 380 aa21.97■■□□□ 1.11
HLA-C-201ENST00000376228 CCDC195A0A1B0GUA6 201 aa21.96■■□□□ 1.11
HLA-C-201ENST00000376228 YJEFN3A6XGL0 299 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms