RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 SKIV2L2P42285 1042 aaKnown RBP12.18□□□□□ -0.46
MCF2L-202ENST00000375597 PRAMEP78395 509 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 CDC16Q13042 620 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 ZNF460Q14592 562 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 PRKD1Q15139 912 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-202ENST00000375597 SFT2D3Q587I9 215 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 PMF1Q6P1K2 205 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 BRSK2Q8IWQ3 736 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 RNF169Q8NCN4 708 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 NKD2Q969F2 451 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-202ENST00000375597 PTCD3Q96EY7 689 aaKnown RBP12.18□□□□□ -0.46
MCF2L-202ENST00000375597 CATSPER2Q96P56 530 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 NUF2Q9BZD4 464 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 GOLGA2P5Q9HBQ8 144 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 PRM3Q9NNZ6 103 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 TM9SF1O15321 606 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 SPATA31D3P0C874 917 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 RARBP10826 455 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 AKAP5P24588 427 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 ASPAP45381 313 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 SLC1A6P48664 564 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 PITX1P78337 314 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 POU5F1BQ06416 359 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 KIZQ2M2Z5 673 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 DCAF6Q58WW2 860 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 STYK1Q6J9G0 422 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 TRNP1Q6NT89 227 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 SPATA31D4Q6ZUB0 917 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 MAP7D3Q8IWC1 876 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 PLD5Q8N7P1 536 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 TTC13Q8NBP0 860 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 DIS3LQ8TF46 1054 aaKnown RBP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 ADA2Q9NZK5 511 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 KLHL8Q9P2G9 620 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 HESX1Q9UBX0 185 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 TAGLN3Q9UI15 199 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 FARP1Q9Y4F1 1045 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 SNX10Q9Y5X0 201 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 BTAF1O14981 1849 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 ZC3H11AO75152 810 aaKnown RBP eCLIP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 LAMB3Q13751 1172 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 HSP90AA5PQ58FG0 334 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 TREML2Q5T2D2 321 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 PPP1R26Q5T8A7 1209 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 C15orf39Q6ZRI6 1047 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 LRRC43Q8N309 656 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 PCDH19Q8TAB3 1148 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 AGAP2Q99490 1192 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 DPEP3Q9H4B8 488 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 COPS7BQ9H9Q2 264 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 LNPEPQ9UIQ6 1025 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 SLC39A10Q9ULF5 831 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 STRIP2Q9ULQ0 834 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 TIMM13Q9Y5L4 95 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 GOLGA4Q13439 2230 aaKnown RBP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 SIGLEC16A6NMB1 481 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 TCEA3O75764 348 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 ARIH2O95376 493 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 COPAP53621 1224 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 IRF9Q00978 393 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 TBL3Q12788 808 aaKnown RBP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 MED21Q13503 144 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 GEN1Q17RS7 908 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 TMEM176AQ96HP8 235 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 CELF6Q96J87 481 aaKnown RBP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 ECSITQ9BQ95 431 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 RSAD1Q9HA92 442 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 PCDHGB4Q9UN71 923 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 PLLPQ9Y342 182 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 HBS1LQ9Y450 684 aaKnown RBP12.17□□□□□ -0.46
MCF2L-202ENST00000375597 PCDHGB5Q9Y5G0 923 aa12.17□□□□□ -0.46
MCF2L-202ENST00000375597 A8MXQ7 604 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 MED7O43513 233 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 LMNAP02545 664 aaKnown RBP12.16□□□□□ -0.46
MCF2L-202ENST00000375597 APOEP02649 317 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 CCDC15Q0P6D6 951 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 PDK1Q15118 436 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 PAN2Q504Q3 1202 aaKnown RBP12.16□□□□□ -0.46
MCF2L-202ENST00000375597 SPDYAQ5MJ70 313 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 CYP2R1Q6VVX0 501 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 TMPRSS6Q8IU80 811 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 RYBPQ8N488 228 aaPredicted RBP12.16□□□□□ -0.46
MCF2L-202ENST00000375597 SLC4A11Q8NBS3 891 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 ICA1LQ8NDH6 482 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 ATP2A3Q93084 1043 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 SKA1Q96BD8 255 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 PPWD1Q96BP3 646 aaKnown RBP12.16□□□□□ -0.46
MCF2L-202ENST00000375597 GPRASP2Q96D09 838 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 SIK2Q9H0K1 926 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 LIN28AQ9H9Z2 209 aaKnown RBP12.16□□□□□ -0.46
MCF2L-202ENST00000375597 TMEM216Q9P0N5 145 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 HEMK1Q9Y5R4 338 aaPredicted RBP12.16□□□□□ -0.46
MCF2L-202ENST00000375597 A6NHS1 94 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 TBC1D12O60347 775 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 ACADSP16219 412 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 PSMB4P28070 264 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 ARL1P40616 181 aaPredicted RBP12.16□□□□□ -0.46
MCF2L-202ENST00000375597 TFDP2Q14188 446 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 FBXO48Q5FWF7 155 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 PDPK2PQ6A1A2 396 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms