RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ZNF512Q96ME7 567 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-203ENST00000375274 FHDC1Q9C0D6 1143 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-203ENST00000375274 NEUROG2Q9H2A3 272 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 EXOSC4Q9NPD3 245 aaKnown RBP11.85□□□□□ -0.51
PTCH1-203ENST00000375274 SIGLEC16A6NMB1 481 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 DCDC2CA8MYV0 355 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 TOMM70O94826 608 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 PGK2P07205 417 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 PGAM1P18669 254 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 RPL7AP62424 266 aaKnown RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 POU6F1Q14863 301 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 ARHGEF6Q15052 776 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 MAPRE1Q15691 268 aaKnown RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 LPCAT2Q7L5N7 544 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 DCP1BQ8IZD4 617 aaKnown RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 ADGRF2Q8IZF7 708 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 FAM136AQ96C01 138 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 DDX50Q9BQ39 737 aaKnown RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 APOL5Q9BWW9 433 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 GPR63Q9BZJ6 419 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 UNKQ9C0B0 810 aaKnown RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 TRMT6Q9UJA5 497 aaKnown RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 E5RJQ4 531 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 RNF103O00237 685 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 TPH1P17752 444 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 MMRN1Q13201 1228 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 ZACNQ401N2 412 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 MFSD5Q6N075 450 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 KCNMB4Q86W47 210 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 DNERQ8NFT8 737 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 TNIP2Q8NFZ5 429 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 RPRD1AQ96P16 312 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 LRMDAQ9H2I8 198 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 IKZF4Q9H2S9 585 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 ZNF556Q9HAH1 456 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 DDX18Q9NVP1 670 aaKnown RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 WDR70Q9NW82 654 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 ITGA11Q9UKX5 1188 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 RNF112Q9ULX5 631 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 DCCP43146 1447 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 VWA5AO00534 786 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 CYB561D2O14569 222 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 SLC2A3P11169 496 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 HLA-DPA1P20036 260 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 MLH1P40692 756 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 NOMO3P69849 1222 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 TBCELQ5QJ74 424 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 BBS12Q6ZW61 710 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 LZICQ8WZA0 190 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 PHF21BQ96EK2 531 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 FICDQ9BVA6 458 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 TMEM161AQ9NX61 479 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 GPRC5DQ9NZD1 345 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 VTI1BQ9UEU0 232 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 RPL26L1Q9UNX3 145 aaKnown RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 ATP11BQ9Y2G3 1177 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 C2CD2Q9Y426 696 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 ALOX15BO15296 676 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 CHADO15335 359 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 ITGAVP06756 1048 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 ATP4AP20648 1035 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 GLRA2P23416 452 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 CD151P48509 253 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 PPIDQ08752 370 aaKnown RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 LRRC74AQ0VAA2 488 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 SNAPC2Q13487 334 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 TIGD7Q6NT04 549 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 FBXO16Q8IX29 292 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-203ENST00000375274 LRRC57Q8N9N7 239 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 GPRC5AQ8NFJ5 357 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 MPP4Q96JB8 637 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 OSBPL7Q9BZF2 842 aa11.84□□□□□ -0.51
PTCH1-203ENST00000375274 SAC3D1A6NKF1 404 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 DDX3YO15523 660 aaKnown RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 FBXO21O94952 628 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 MYCP01106 439 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 ATP6V1C1P21283 382 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 FASP25445 335 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 AKT1P31749 480 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 DEFA1P59665 94 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 DEFA3P59666 94 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 YWHAZP63104 245 aaKnown RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 RUNX1T1Q06455 604 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 DACT2Q5SW24 774 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 GLB1LQ6UWU2 654 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 OTOAQ7RTW8 1153 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 HORMAD1Q86X24 394 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 ZDHHC17Q8IUH5 632 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 RMND5BQ96G75 393 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 CPNE1Q99829 537 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 NMRAL1Q9HBL8 299 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 CROTQ9UKG9 612 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 SYNPO2Q9UMS6 1093 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 TKTL1P51854 596 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 PRKAA2P54646 552 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 TAS2R40P59535 323 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 MRPS22P82650 360 aaKnown RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 SLC25A3Q00325 362 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 RIPK1Q13546 671 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 PARP6Q2NL67 630 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms