RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 OTUD3Q5T2D3 398 aaPredicted RBP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 MMGT1Q8N4V1 131 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 FAR2Q96K12 515 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 MARK4Q96L34 752 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 KCTD14Q9BQ13 255 aaPredicted RBP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 ALDH8A1Q9H2A2 487 aaPredicted RBP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 USP12O75317 370 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 VDRP11473 427 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 GRK2P25098 689 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 NOS3P29474 1203 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 CCR4P51679 360 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 PDIA6Q15084 440 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 PDPK2PQ6A1A2 396 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 PARVBQ9HBI1 364 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 PAPOLBQ9NRJ5 636 aaKnown RBP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 SHOC2Q9UQ13 582 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 CRYL1Q9Y2S2 319 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 NDST1P52848 882 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 CRYMQ14894 314 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 VPS72Q15906 364 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 STYK1Q6J9G0 422 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 ZNF677Q86XU0 584 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 GMCL1Q96IK5 515 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 ACTR8Q9H981 624 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 AGO4Q9HCK5 861 aaKnown RBP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 CYP39A1Q9NYL5 469 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 LNPEPQ9UIQ6 1025 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 VANGL2Q9ULK5 521 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 TMCC3Q9ULS5 477 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 FAM25AB3EWG3 89 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 FAM25CB3EWG5 89 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 FAM25GB3EWG6 89 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 BUD23O43709 281 aaKnown RBP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 VCLP18206 1134 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 AMPD1P23109 780 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 NLRP9Q7RTR0 991 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 SH3GL3Q99963 347 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 KLHL3Q9UH77 587 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 MICAL2O94851 1124 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 KRT16P08779 473 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 C16orf72Q14CZ0 275 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 ZCCHC23Q6ZST2 131 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 UTS2BQ765I0 119 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 VPS33BQ9H267 617 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 DCDC2Q9UHG0 476 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 COPG1Q9Y678 874 aaKnown RBP15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 USP17L7P0C7H9 530 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 NAMPTP43490 491 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 BCAT1P54687 386 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 SLC39A12Q504Y0 691 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 SEL1L3Q68CR1 1132 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 HDDC2Q7Z4H3 204 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 ELOVL6Q9H5J4 265 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 RMND5AQ9H871 391 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 IL1RAPL1Q9NZN1 696 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 GULP1Q9UBP9 304 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 SPATA31A6Q5VVP1 1343 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 ABCC3O15438 1527 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 PSTPIP1O43586 416 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 GLRA3O75311 464 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 AMD1P17707 334 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 MGAT1P26572 445 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 IRAK1P51617 712 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 IL5RAQ01344 420 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 MAPK7Q13164 816 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 GRIK4Q16099 956 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 SAPCD2Q86UD0 394 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 GRIN3AQ8TCU5 1115 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 ZBTB45Q96K62 511 aaPredicted RBP15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 MTA3Q9BTC8 594 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 ABCG8Q9H221 673 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 ARHGEF3Q9NR81 526 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 SNCAIPQ9Y6H5 919 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 TECPR2O15040 1411 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 ABCA8O94911 1581 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 LRRIQ3A6PVS8 624 aaPredicted RBP15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 FGFR3P22607 806 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 SERPINB1P30740 379 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 CSTF3Q12996 717 aaKnown RBP15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 TSGA10IPQ3SY00 556 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 HERC6Q8IVU3 1022 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 IQCMA0A1B0GVH7 501 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 TIPRLO75663 272 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 SLC2A3P11169 496 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 INSRRP14616 1297 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 ITGALP20701 1170 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 FMO4P31512 558 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 SEC13P55735 322 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 BOLA3Q53S33 107 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 ARHGEF19Q8IW93 802 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 CASP10Q92851 521 aa15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 GPN3Q9UHW5 284 aaPredicted RBP15.09■□□□□ 0.01
NOTCH4-201ENST00000375023 A0A1W2PQJ5 194 aa15.08■□□□□ 0.01
NOTCH4-201ENST00000375023 OTOP2Q7RTS6 562 aa15.08■□□□□ 0.01
NOTCH4-201ENST00000375023 SPPL2AQ8TCT8 520 aa15.08■□□□□ 0.01
NOTCH4-201ENST00000375023 CDC42EP4Q9H3Q1 356 aaKnown RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms