RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 TASP1Q9H6P5 420 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 IL21Q9HBE4 155 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 POLR3BQ9NW08 1133 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 HESX1Q9UBX0 185 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CNOT8Q9UFF9 292 aaKnown RBP11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GTF3C4Q9UKN8 822 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ANGPTL2Q9UKU9 493 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 JRKLQ9Y4A0 524 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ASB3Q9Y575 518 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 NME7Q9Y5B8 376 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 FAM208BQ5VWN6 2430 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 FAM170AA1A519 330 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 M0QYV0 167 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 FOXD2O60548 495 aaPredicted RBP11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PALMO75781 387 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 FGF19O95750 216 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MMP8P22894 467 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PCSK1P29120 753 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PMLP29590 882 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CDC25CP30307 473 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GPD2P43304 727 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 HADHBP55084 474 aaKnown RBP11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 VEPH1Q14D04 833 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GOLGA7BQ2TAP0 167 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 N4BP2L1Q5TBK1 243 aaPredicted RBP11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 NAIF1Q69YI7 327 aaPredicted RBP11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TRIM68Q6AZZ1 485 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MON1BQ7L1V2 547 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SYCE1Q8N0S2 351 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SYNPOQ8N3V7 929 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 B3GALNT2Q8NCR0 500 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 C1orf131Q8NDD1 294 aaKnown RBP11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 STKLD1Q8NE28 680 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TPCN2Q8NHX9 752 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 UBA3Q8TBC4 463 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GIPC2Q8TF65 315 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CHFRQ96EP1 664 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ACBD6Q9BR61 282 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MRPL47Q9HD33 250 aaKnown RBP11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 HPS4Q9NQG7 708 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 UVRAGQ9P2Y5 699 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 RALYQ9UKM9 306 aaKnown RBP11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TSPAN16Q9UKR8 245 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CDH9Q9ULB4 789 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CCL26Q9Y258 94 aa11.46□□□□□ -0.57
HLA-DQA1-202ENST00000374949 OTOL1A6NHN0 477 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 HCRTO43612 131 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 RNF40O75150 1001 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 URI1O94763 535 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MTA2O94776 668 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SETSIPP0DME0 302 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 RRM1P23921 792 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ACAT1P24752 427 aaKnown RBP11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 LIMK1P53667 647 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SNX16P57768 344 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PTP4A2Q12974 167 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TUBB2AQ13885 445 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ZNF268Q14587 947 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 STPG1Q5TH74 334 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TCEAL6Q6IPX3 200 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MMS22LQ6ZRQ5 1243 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ANKRD52Q8NB46 1076 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 RIN3Q8TB24 985 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 STK32AQ8WU08 396 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 UBE2Q2Q8WVN8 375 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TCEAL3Q969E4 200 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 C18orf8Q96DM3 657 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 HHIPQ96QV1 700 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 HNRNPABQ99729 332 aaKnown RBP11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SYT15Q9BQS2 421 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 C11orf70Q9BRQ4 267 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TUBB2BQ9BVA1 445 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 NUP85Q9BW27 656 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SLC46A2Q9BY10 475 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MIS12Q9H081 205 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ZCWPW1Q9H0M4 648 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 EBF3Q9H4W6 596 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 GKN1Q9NS71 199 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 FAM49BQ9NUQ9 324 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PARVAQ9NVD7 372 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 THG1LQ9NWX6 298 aaKnown RBP11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 STRIP2Q9ULQ0 834 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SLC8A2Q9UPR5 921 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CAPN6Q9Y6Q1 641 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SCINQ9Y6U3 715 aa11.45□□□□□ -0.58
HLA-DQA1-202ENST00000374949 GRID2IPA4D2P6 1211 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TM4SF5O14894 197 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ATP2C2O75185 946 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 EGFP01133 1207 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ZNF806P0C7X5 589 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CCDC130P13994 396 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ARSAP15289 507 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ADORA2BP29275 332 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 WEE1P30291 646 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MPLP40238 635 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 GABRB2P47870 512 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 GPR15P49685 360 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SLC8A3P57103 927 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PSMC1P62191 440 aaKnown RBP11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 GRSF1Q12849 480 aaKnown RBP eCLIP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms