RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 STAMBPL1Q96FJ0 436 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 THOC1Q96FV9 657 aaKnown RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 PIWIL1Q96J94 861 aaKnown RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 HSFY1Q96LI6 401 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 GPATCH2LQ9NWQ4 482 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 GEMIN8Q9NWZ8 242 aaKnown RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 FLRT1Q9NZU1 646 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 CNTN3Q9P232 1028 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 HAO1Q9UJM8 370 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 UBQLN1Q9UMX0 589 aaKnown RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 TRIM33Q9UPN9 1127 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 HEY1Q9Y5J3 304 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 RALGAPA2Q2PPJ7 1873 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 EVPLQ92817 2033 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 WDR91A4D1P6 747 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 TRIM49D1C9J1S8 452 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 I3L4J1 428 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 HGSO14964 777 aaPredicted RBP14.42□□□□□ -0.1
HMGCL-203ENST00000374490 ANP32DO95626 131 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 ZNF865P0CJ78 1059 aaPredicted RBP14.42□□□□□ -0.1
HMGCL-203ENST00000374490 PYGBP11216 843 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 FGFR1P11362 822 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 MLNP12872 115 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 AXLP30530 894 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 FDFT1P37268 417 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 SERPINB4P48594 390 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 CCNG1P51959 295 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 HDAC4P56524 1084 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 NAB1Q13506 487 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 CCL14Q16627 93 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 ATG16L1Q676U5 607 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 NOTUMQ6P988 496 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 STRADAQ7RTN6 431 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 CLNKQ7Z7G1 428 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 CAND1Q86VP6 1230 aaKnown RBP14.42□□□□□ -0.1
HMGCL-203ENST00000374490 CTAGE3PQ8IX95 158 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 CRYBG2Q8N1P7 616 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 PPM1NQ8N819 430 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 C12orf29Q8N999 325 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 OR6B3Q8NGW1 331 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 GSDMBQ8TAX9 411 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 SLC7A6OSQ96CW6 309 aaPredicted RBP14.42□□□□□ -0.1
HMGCL-203ENST00000374490 FAM111AQ96PZ2 611 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 KLF6Q99612 283 aaPredicted RBP14.42□□□□□ -0.1
HMGCL-203ENST00000374490 EBNA1BP2Q99848 306 aaKnown RBP14.42□□□□□ -0.1
HMGCL-203ENST00000374490 FERMT1Q9BQL6 677 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 C11orf84Q9BUA3 381 aaPredicted RBP14.42□□□□□ -0.1
HMGCL-203ENST00000374490 PAK6Q9NQU5 681 aaPredicted RBP14.42□□□□□ -0.1
HMGCL-203ENST00000374490 GJD2Q9UKL4 321 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 KAT6AQ92794 2004 aa14.42□□□□□ -0.1
HMGCL-203ENST00000374490 FAM159BA6NKW6 160 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 A8MXQ7 604 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 PIK3R2O00459 728 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 CCDC22O60826 627 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 C1QAP02745 245 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 T-ENOLP0DO92 83 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 L1CAMP32004 1257 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 SLC8A3P57103 927 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 SEMA5AQ13591 1074 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 KRT72Q14CN4 511 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 RAB6CQ53S08 254 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 MARCH8Q5T0T0 291 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 CATSPER4Q7RTX7 472 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 LONP2Q86WA8 852 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 CCNJLQ8IV13 435 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 TMEM130Q8N3G9 435 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 UTP4Q969X6 686 aaKnown RBP14.41□□□□□ -0.1
HMGCL-203ENST00000374490 TTC17Q96AE7 1141 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 C7orf26Q96N11 449 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 SRPK1Q96SB4 655 aaKnown RBP14.41□□□□□ -0.1
HMGCL-203ENST00000374490 ADAM33Q9BZ11 813 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 RAB6CQ9H0N0 254 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 AP5M1Q9H0R1 490 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 ADAMTS10Q9H324 1103 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 FAM49BQ9NUQ9 324 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 AP4E1Q9UPM8 1137 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 GNEQ9Y223 722 aaKnown RBP14.41□□□□□ -0.1
HMGCL-203ENST00000374490 ADCY6O43306 1168 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 STK10O94804 968 aaKnown RBP14.41□□□□□ -0.1
HMGCL-203ENST00000374490 APRTP07741 180 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 ARL4AP40617 200 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 CPT1AP50416 773 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 CA9Q16790 459 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 PPP6R3Q5H9R7 873 aaPredicted RBP14.41□□□□□ -0.1
HMGCL-203ENST00000374490 EFHC1Q5JVL4 640 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 C9orf57Q5W0N0 161 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 ZNF449Q6P9G9 518 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 TIFABQ6ZNK6 161 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 MTDHQ86UE4 582 aaKnown RBP14.41□□□□□ -0.1
HMGCL-203ENST00000374490 TBC1D10AQ9BXI6 508 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 DHX35Q9H5Z1 703 aaKnown RBP14.41□□□□□ -0.1
HMGCL-203ENST00000374490 RNPEPL1Q9HAU8 725 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 EIF2B3Q9NR50 452 aaKnown RBP14.41□□□□□ -0.1
HMGCL-203ENST00000374490 SNTG2Q9NY99 539 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.41□□□□□ -0.1
HMGCL-203ENST00000374490 PLLPQ9Y342 182 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 PCDHA11Q9Y5I1 949 aa14.41□□□□□ -0.1
HMGCL-203ENST00000374490 SF3B1O75533 1304 aaKnown RBP eCLIP14.4□□□□□ -0.1
HMGCL-203ENST00000374490 A8MUI8 341 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 BIRC5O15392 142 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms