RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 PTDSS1P48651 473 aaKnown RBP16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 KPNB1Q14974 876 aaKnown RBP16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 DPYSL2Q16555 572 aa16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 CES3Q6UWW8 571 aa16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 CATSPER4Q7RTX7 472 aa16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 DEPDC1BQ8WUY9 529 aa16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 KBTBD7Q8WVZ9 684 aa16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 MIEF2Q96C03 454 aa16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 EBNA1BP2Q99848 306 aaKnown RBP16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 BTBD10Q9BSF8 475 aa16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 TAS2R1Q9NYW7 299 aa16.1■□□□□ 0.17
TMEM50A-201ENST00000374358 GSC2O15499 205 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 MFSD11O43934 449 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 KRT36O76013 467 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 SESN2P58004 480 aaPredicted RBP16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 RCN2Q14257 317 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 CDKL3Q8IVW4 592 aaPredicted RBP16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 PDCD7Q8N8D1 485 aaKnown RBP16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 GSDMBQ8TAX9 411 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 E2F7Q96AV8 911 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 FAM149B1Q96BN6 582 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 NSL1Q96IY1 281 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 TLE6Q9H808 572 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 PSAT1Q9Y617 370 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 CCDC22O60826 627 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 SNAI1O95863 264 aaPredicted RBP16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 ENO1P06733 434 aaKnown RBP16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 SMPD1P17405 629 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 ZNF792Q3KQV3 632 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 ACSBG2Q5FVE4 666 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 HEATR6Q6AI08 1181 aaKnown RBP16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 RPAINQ86UA6 219 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 NUDCD3Q8IVD9 361 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 ADGRF2Q8IZF7 708 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 DTX3LQ8TDB6 740 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 LENG1Q96BZ8 264 aaPredicted RBP16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 EBF4Q9BQW3 602 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 C11orf84Q9BUA3 381 aaPredicted RBP16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 RNF39Q9H2S5 420 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 RNF181Q9P0P0 153 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 SEPT10Q9P0V9 454 aa16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 MTO1Q9Y2Z2 717 aaKnown RBP16.09■□□□□ 0.17
TMEM50A-201ENST00000374358 CLDN5O00501 218 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 LYPLA1O75608 230 aaPredicted RBP16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 STAU1O95793 577 aaKnown RBP16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 ESRRAP11474 423 aaPredicted RBP16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 MAGEA6P43360 314 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 GTF2A2P52657 109 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 NBPF20Q3BBV1 942 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 TEX44Q53QW1 395 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 C9orf57Q5W0N0 161 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 KATNBL1Q9H079 304 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 PPARGC1AQ9UBK2 798 aaKnown RBP16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 ZNF180Q9UJW8 692 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 SBF1O95248 1867 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 FAM159BA6NKW6 160 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 H3BRJ5 948 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 I3L4J1 428 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 ACAT1P24752 427 aaKnown RBP16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 AQP5P55064 265 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 TMEM40Q8WWA1 233 aa16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 QKIQ96PU8 341 aaKnown RBP eCLIP16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 DICER1Q9UPY3 1922 aaKnown RBP16.08■□□□□ 0.16
TMEM50A-201ENST00000374358 GCATO75600 419 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 TGDSO95455 350 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 PAX7P23759 505 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 CCNFP41002 786 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 ALDH18A1P54886 795 aaKnown RBP16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 OCRLQ01968 901 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 KDSRQ06136 332 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 SOX4Q06945 474 aaPredicted RBP16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 RCN1Q15293 331 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 STILQ15468 1287 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 CTU1Q7Z7A3 348 aaKnown RBP16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 SHKBP1Q8TBC3 707 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 MCUR1Q96AQ8 359 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 NAF1Q96HR8 494 aaKnown RBP16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 CLPTM1LQ96KA5 538 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 TRIM6Q9C030 488 aaPredicted RBP16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 MAGED2Q9UNF1 606 aaPredicted RBP16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 KRT38O76015 456 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 BEST1O76090 585 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 MMP3P08254 477 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 MGAT1P26572 445 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 NDUFV1P49821 464 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 RPL10AP62906 217 aaKnown RBP16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 ADIGQ0VDE8 80 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 AP1B1Q10567 949 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 BST2Q10589 180 aaKnown RBP16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 ZBTB6Q15916 424 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 PAXIP1Q6ZW49 1069 aaPredicted RBP16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 SLC26A9Q7LBE3 791 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 DEFB106AQ8N104 65 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 MAB21L3Q8N8X9 362 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 MCUQ8NE86 351 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 HTR3CQ8WXA8 447 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 ADAMTS10Q9H324 1103 aa16.07■□□□□ 0.16
TMEM50A-201ENST00000374358 SIRPGQ9P1W8 387 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms