RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 RTKNQ9BST9 563 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 CCDC68Q9H2F9 335 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 ANLNQ9NQW6 1124 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 PNPLA3Q9NST1 481 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 GID8Q9NWU2 228 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 ZHX2Q9Y6X8 837 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 DDX60LQ5H9U9 1706 aaKnown RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 ZNF536O15090 1300 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 PRSS51A0A1B0GVH4 220 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 C7orf72A4D263 438 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 AQP9O43315 295 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 CLASP2O75122 1294 aaKnown RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 TOM1L1O75674 476 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 TCF4P15884 667 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 NCF2P19878 526 aaPredicted RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 CA8P35219 290 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 RPL22P35268 128 aaKnown RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 CDH15P55291 814 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 LIN9Q5TKA1 542 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 MAVSQ7Z434 540 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 SAPCD2Q86UD0 394 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 PHTF2Q8N3S3 785 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 TMEM102Q8N9M5 508 aaPredicted RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 NT5C1BQ96P26 610 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 MRPL47Q9HD33 250 aaKnown RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 ATAD3AQ9NVI7 634 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 ZNRF3Q9ULT6 936 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 PRPF19Q9UMS4 504 aaKnown RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 NOX1Q9Y5S8 564 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 SCINQ9Y6U3 715 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 NAV1Q8NEY1 1877 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 hCG_1818297A0A087WSY0 165 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 H0YJX3 145 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 EIF2AK2P19525 551 aaKnown RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 EPHA3P29320 983 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 ECE1P42892 770 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 MOGQ16653 247 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 NRF1Q16656 503 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 CYP2A13Q16696 494 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 CTAGE3PQ8IX95 158 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 PPM1NQ8N819 430 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 XXYLT1Q8NBI6 393 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 EFHD2Q96C19 240 aaPredicted RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 ANKRD36BP1Q96IX9 119 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 P2RX7Q99572 595 aaKnown RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 DHX33Q9H6R0 707 aaKnown RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 C10orf88Q9H8K7 445 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 CLK4Q9HAZ1 481 aaKnown RBP13.31□□□□□ -0.28
PRPF4-201ENST00000374198 DNAJC28Q9NX36 388 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 BCAP29Q9UHQ4 241 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 SERPINA10Q9UK55 444 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 CDC14AQ9UNH5 594 aa13.31□□□□□ -0.28
PRPF4-201ENST00000374198 TLR3O15455 904 aaKnown RBP13.3□□□□□ -0.28
PRPF4-201ENST00000374198 BMXP51813 675 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 GSTO1P78417 241 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 ZBTB17Q13105 803 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 AP3B2Q13367 1082 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 MGAT5BQ3V5L5 792 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 TEDDM1Q5T9Z0 273 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 LGSNQ5TDP6 509 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 KRT80Q6KB66 452 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 ELMO3Q96BJ8 720 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 ZNF597Q96LX8 424 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 C11orf70Q9BRQ4 267 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 OSBPL11Q9BXB4 747 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 HSPBP1Q9NZL4 362 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 SLC8A2Q9UPR5 921 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 SPO11Q9Y5K1 396 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 IQCA1LA6NCM1 817 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.3□□□□□ -0.28
PRPF4-201ENST00000374198 MEIS2O14770 477 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 DCXO43602 365 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 SPAG6O75602 509 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 XRCC1P18887 633 aaPredicted RBP13.3□□□□□ -0.28
PRPF4-201ENST00000374198 CRHR1P34998 444 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 GPC3P51654 580 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 PEX3P56589 373 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 ARPC4P59998 168 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 PPP2R5DQ14738 602 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 NR1D2Q14995 579 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 ZFPM1Q8IX07 1006 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 PCYOX1LQ8NBM8 494 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 APBB2Q92870 758 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 ATP2A3Q93084 1043 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 TMEM79Q9BSE2 394 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 UNKQ9C0B0 810 aaKnown RBP13.3□□□□□ -0.28
PRPF4-201ENST00000374198 NDEL1Q9GZM8 345 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 RPF2Q9H7B2 306 aaKnown RBP13.3□□□□□ -0.28
PRPF4-201ENST00000374198 TUFT1Q9NNX1 390 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 ERGIC3Q9Y282 383 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 TEX264Q9Y6I9 313 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 IVNS1ABPQ9Y6Y0 642 aa13.3□□□□□ -0.28
PRPF4-201ENST00000374198 FAM47E-STBD1D6RA91 191 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 EIF3FO00303 357 aaPredicted RBP13.29□□□□□ -0.28
PRPF4-201ENST00000374198 P4HBP07237 508 aaKnown RBP13.29□□□□□ -0.28
PRPF4-201ENST00000374198 GABRB3P28472 473 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 SLC1A6P48664 564 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 THOP1P52888 689 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 PHKG1Q16816 387 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 FASTKD1Q53R41 847 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms