RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 DCP1BQ8IZD4 617 aaKnown RBP25.89■■□□□ 1.73
CTSA-203ENST00000372459 CNOT10Q9H9A5 744 aaKnown RBP25.89■■□□□ 1.73
CTSA-203ENST00000372459 ARHGEF4Q9NR80 690 aa25.89■■□□□ 1.73
CTSA-203ENST00000372459 TMPRSS4Q9NRS4 437 aa25.89■■□□□ 1.73
CTSA-203ENST00000372459 DDIT4Q9NX09 232 aa25.89■■□□□ 1.73
CTSA-203ENST00000372459 SLC12A6Q9UHW9 1150 aa25.89■■□□□ 1.73
CTSA-203ENST00000372459 MYCP01106 439 aaPredicted RBP25.88■■□□□ 1.73
CTSA-203ENST00000372459 ATP5DP30049 168 aa25.88■■□□□ 1.73
CTSA-203ENST00000372459 GUCY1A3Q02108 690 aa25.88■■□□□ 1.73
CTSA-203ENST00000372459 SCAPQ12770 1279 aa25.88■■□□□ 1.73
CTSA-203ENST00000372459 FASTKD3Q14CZ7 662 aaKnown RBP25.88■■□□□ 1.73
CTSA-203ENST00000372459 BSPRYQ5W0U4 402 aa25.88■■□□□ 1.73
CTSA-203ENST00000372459 EDEM1Q92611 657 aa25.88■■□□□ 1.73
CTSA-203ENST00000372459 ZCWPW1Q9H0M4 648 aa25.88■■□□□ 1.73
CTSA-203ENST00000372459 DTLQ9NZJ0 730 aa25.88■■□□□ 1.73
CTSA-203ENST00000372459 FBXW11Q9UKB1 542 aa25.88■■□□□ 1.73
CTSA-203ENST00000372459 LRFN2Q9ULH4 789 aa25.88■■□□□ 1.73
CTSA-203ENST00000372459 TCRBV7S3A2A0A539 114 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 SYN3O14994 580 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 TRIM66O15016 1216 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 TMEM63AO94886 807 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 GRIK1P39086 918 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 IFI35P80217 286 aaPredicted RBP25.87■■□□□ 1.73
CTSA-203ENST00000372459 ARL13BQ3SXY8 428 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 SLC39A12Q504Y0 691 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 C10orf67Q8IYJ2 551 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 QKIQ96PU8 341 aaKnown RBP eCLIP25.87■■□□□ 1.73
CTSA-203ENST00000372459 ETNK2Q9NVF9 386 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.87■■□□□ 1.733e-6■■□□□ 12.6
CTSA-203ENST00000372459 OGDHLQ9ULD0 1010 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.87■■□□□ 1.73
CTSA-203ENST00000372459 EEF2KO00418 725 aaKnown RBP25.87■■□□□ 1.73
CTSA-203ENST00000372459 CHADO15335 359 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 CREB3O43889 395 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 PQBP1O60828 265 aaKnown RBP25.87■■□□□ 1.73
CTSA-203ENST00000372459 KCNT2Q6UVM3 1135 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 BEND5Q7L4P6 421 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 PDIK1LQ8N165 341 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 BCAS4Q8TDM0 211 aa25.87■■□□□ 1.73
CTSA-203ENST00000372459 HACD1B0YJ81 288 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 OR4Q2P0C623 313 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 GAD2Q05329 585 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 KCNJ11Q14654 390 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 MTFR1Q15390 333 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 PPP1R21Q6ZMI0 780 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 TAOK1Q7L7X3 1001 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 CASD1Q96PB1 797 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 COLEC11Q9BWP8 271 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 RAB6BQ9NRW1 208 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 PATJQ8NI35 1801 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 SF3B1O75533 1304 aaKnown RBP eCLIP25.86■■□□□ 1.73
CTSA-203ENST00000372459 E7ESA3 106 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 MAGEA9P43362 315 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 SLC5A3P53794 718 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 HP1BP3Q5SSJ5 553 aaPredicted RBP25.86■■□□□ 1.73
CTSA-203ENST00000372459 FNBP1LQ5T0N5 605 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 SCAMP5Q8TAC9 235 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 OLFM3Q96PB7 478 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 KLC2Q9H0B6 622 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 RNF208Q9H0X6 261 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 ADAM28Q9UKQ2 775 aa25.86■■□□□ 1.73
CTSA-203ENST00000372459 HOXA2O43364 376 aa25.85■■□□□ 1.73
CTSA-203ENST00000372459 DGKIO75912 1065 aa25.85■■□□□ 1.73
CTSA-203ENST00000372459 NFE2Q16621 373 aaPredicted RBP25.85■■□□□ 1.73
CTSA-203ENST00000372459 HEATR6Q6AI08 1181 aaKnown RBP25.85■■□□□ 1.73
CTSA-203ENST00000372459 RFX8Q6ZV50 586 aa25.85■■□□□ 1.73
CTSA-203ENST00000372459 CCDC13Q8IYE1 715 aa25.85■■□□□ 1.73
CTSA-203ENST00000372459 PYROXD1Q8WU10 500 aa25.85■■□□□ 1.73
CTSA-203ENST00000372459 TFB1MQ8WVM0 346 aaKnown RBP25.85■■□□□ 1.73
CTSA-203ENST00000372459 WDCPQ9H6R7 721 aa25.85■■□□□ 1.73
CTSA-203ENST00000372459 VPS37BQ9H9H4 285 aa25.85■■□□□ 1.73
CTSA-203ENST00000372459 MFHAS1Q9Y4C4 1052 aa25.85■■□□□ 1.73
CTSA-203ENST00000372459 COL4A4P53420 1690 aaPredicted RBP25.85■■□□□ 1.73
CTSA-203ENST00000372459 CDH16O75309 829 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 LSP1P33241 339 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 MMP13P45452 471 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 CXCR3P49682 368 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 DPYSQ14117 519 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 VARS2Q5ST30 1063 aaKnown RBP25.84■■□□□ 1.73
CTSA-203ENST00000372459 FUBP3Q96I24 572 aaKnown RBP eCLIP25.84■■□□□ 1.73
CTSA-203ENST00000372459 ABI2Q9NYB9 513 aaPredicted RBP25.84■■□□□ 1.73
CTSA-203ENST00000372459 E7EVH7 732 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 EBAG9O00559 213 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 TNFRSF10BO14763 440 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 MFSD11O43934 449 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 GCATO75600 419 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 CCL5P13501 91 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 CCT5P48643 541 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 TAC4Q86UU9 113 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 ANKMY2Q8IV38 441 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 RIBC1Q8N443 379 aaPredicted RBP25.84■■□□□ 1.73
CTSA-203ENST00000372459 LRRN4Q8WUT4 740 aa25.84■■□□□ 1.73
CTSA-203ENST00000372459 FRMD8Q9BZ67 464 aaPredicted RBP25.84■■□□□ 1.73
CTSA-203ENST00000372459 C5orf60A6NFR6 353 aa25.83■■□□□ 1.73
CTSA-203ENST00000372459 ALDH2P05091 517 aa25.83■■□□□ 1.73
CTSA-203ENST00000372459 ZNF135P52742 658 aaPredicted RBP25.83■■□□□ 1.73
CTSA-203ENST00000372459 YWHAGP61981 247 aaKnown RBP eCLIP25.83■■□□□ 1.73
CTSA-203ENST00000372459 SEMA3BQ13214 749 aa25.83■■□□□ 1.73
CTSA-203ENST00000372459 PAFAH1B3Q15102 231 aaKnown RBP25.83■■□□□ 1.73
CTSA-203ENST00000372459 MSS51Q4VC12 460 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms