RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CHRNGP07510 517 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 DBTP11182 482 aaKnown RBP15.65■□□□□ 0.1
COL5A1-201ENST00000371817 VAV1P15498 845 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 ZRANB3Q5FWF4 1079 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 STRA8Q7Z7C7 330 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 SFRP1Q8N474 314 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 REEP1Q9H902 201 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 CPA3P15088 417 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 TTC30AQ86WT1 665 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 ERGIC3Q9Y282 383 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 GNG14A0A1W2PPG7 69 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 FOXN1O15353 648 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 TOP3BO95985 862 aaKnown RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 RBP1P09455 135 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 CNPP09543 421 aaKnown RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 YWHAQP27348 245 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 PRKAA1Q13131 559 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 FRG1Q14331 258 aaKnown RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 PAPD7Q5XG87 772 aaKnown RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 C11orf63Q6NUN7 778 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 TRPV1Q8NER1 839 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 S100A13Q99584 98 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 GIN1Q9NXP7 522 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 ARF3P61204 181 aaPredicted RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 ARF1P84077 181 aaKnown RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 IL18R1Q13478 541 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 ERMARDQ5T6L9 678 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 ISLR2Q6UXK2 745 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 DHDDSQ86SQ9 333 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 TMEM132CQ8N3T6 1108 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 GREM2Q9H772 168 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 ANKZF1Q9H8Y5 726 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 LY9Q9HBG7 655 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 CLN6Q9NWW5 311 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 STOX2Q9P2F5 926 aaPredicted RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 OR14I1A6ND48 311 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 PRKAA2P54646 552 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 CDK16Q00536 496 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 GRIK3Q13003 919 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 CCDC167Q9P0B6 97 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 PMF1-BGLAPU3KQ54 211 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 UNC5CO95185 931 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 EPN2O95208 641 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 APOC1P02654 83 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 LSM3P62310 102 aaKnown RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 SLC26A11Q86WA9 606 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 EMC1Q8N766 993 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 B3GALNT2Q8NCR0 500 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 GPR63Q9BZJ6 419 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 FAM49BQ9NUQ9 324 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 BARHL2Q9NY43 387 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 GNPTGQ9UJJ9 305 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 CCNL1Q9UK58 526 aaPredicted RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 KIAA0586Q9BVV6 1533 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 ANXA9O76027 345 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 PGK1P00558 417 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 EPB42P16452 691 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 ACADLP28330 430 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 FAM160B2Q86V87 743 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 TRPV5Q9NQA5 729 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 CHORDC1Q9UHD1 332 aaPredicted RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 ABCG2Q9UNQ0 655 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 PCDHB2Q9Y5E7 798 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 DCXO43602 365 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 SERPINA1P01009 418 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 MZF1P28698 734 aaPredicted RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 DYNLL1P63167 89 aaKnown RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 FOLH1Q04609 750 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 RBBP4Q09028 425 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 STILQ15468 1287 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 C7orf25Q9BPX7 421 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 LRMDAQ9H2I8 198 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 MARCH7Q9H992 704 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 GPN1Q9HCN4 374 aaPredicted RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 CYP4F12Q9HCS2 524 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 POLIQ9UNA4 740 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 NAALADL1Q9UQQ1 740 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 ARHGEF7Q14155 803 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 TTC7BQ86TV6 843 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 HIPK1Q86Z02 1210 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 C8orf37Q96NL8 207 aa15.64■□□□□ 0.09
COL5A1-201ENST00000371817 EIF2AK1Q9BQI3 630 aaKnown RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 MRPS7Q9Y2R9 242 aaKnown RBP15.64■□□□□ 0.09
COL5A1-201ENST00000371817 CCDC189A1A4V9 331 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 WWP2O00308 870 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 FAUP35544 74 aaKnown RBP15.63■□□□□ 0.09
COL5A1-201ENST00000371817 MRNIPQ6NTE8 343 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 SRBD1Q8N5C6 995 aaKnown RBP15.63■□□□□ 0.09
COL5A1-201ENST00000371817 POU5F2Q8N7G0 328 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 MIEF1Q9NQG6 463 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 DNAJC11Q9NVH1 559 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 GSAPA4D1B5 854 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 ZNF12P17014 697 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 C15orf38-AP3S2A0A0A6YYH1 394 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 CLRN2A0PK11 232 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 SNAP23O00161 211 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 ARPINQ7Z6K5 226 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 FEZF2Q8TBJ5 459 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 FAR1Q8WVX9 515 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 TTYH1Q9H313 450 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms