RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 PDGFCQ9NRA1 345 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 KANSL3Q9P2N6 904 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 SPATA31C2B4DYI2 1134 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 DDHD2O94830 711 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 GLRBP48167 497 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 SERPINB10P48595 397 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 PCBP1Q15365 356 aaKnown RBP eCLIP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 SLC22A9Q8IVM8 553 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 IL31RAQ8NI17 732 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 SLC2A14Q8TDB8 520 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ADNPQ9H2P0 1102 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 SAR1AQ9NR31 198 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 CASZ1Q86V15 1759 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ATP9AO75110 1047 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ASMTLO95671 621 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 IRF1P10914 325 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 CD151P48509 253 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 OXCT1P55809 520 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 NOMO3P69849 1222 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ITGB3BPQ13352 177 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 POLD3Q15054 466 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 PAN2Q504Q3 1202 aaKnown RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 N4BP2L1Q5TBK1 243 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 KYAT3Q6YP21 454 aaKnown RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 PLPPR4Q7Z2D5 763 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 CKAP2Q8WWK9 683 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ZNF75CPQ92670 426 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 MFSD14AQ96MC6 490 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 SCHIP1Q9P0W5 487 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ASTN2O75129 1339 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 RNF103O00237 685 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 CHADO15335 359 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 TBC1D4O60343 1298 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 MYBL2P10244 700 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ZNF143P52747 638 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 AUHQ13825 339 aaKnown RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 BBS12Q6ZW61 710 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ECSITQ9BQ95 431 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 MTG1Q9BT17 334 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 GLIS2Q9BZE0 524 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 DMAP1Q9NPF5 467 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 TRPM5Q9NZQ8 1165 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 IFT172Q9UG01 1749 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 SLC12A8A0AV02 714 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 LIASO43766 372 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 LCA5LO95447 670 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 ATXN3P54252 364 aaPredicted RBP12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 EFEMP1Q12805 493 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 BFSP2Q13515 415 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 TMEM86AQ8N2M4 240 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 CPNE1Q99829 537 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 APOL5Q9BWW9 433 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 COG4Q9H9E3 785 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 RNF112Q9ULX5 631 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 FCHO1O14526 889 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 FSBPO95073 299 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 GJB6O95452 261 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 GLP2RO95838 553 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 ASS1P00966 412 aaKnown RBP12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 AKAP5P24588 427 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 PSMA4P25789 261 aaKnown RBP12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 RBL1P28749 1068 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 NOS2P35228 1153 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 SERPINB5P36952 375 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 PPP2R3CQ969Q6 453 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 DACH2Q96NX9 599 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 ELOVL4Q9GZR5 314 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 POPDC2Q9HBU9 364 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 TCF7L2Q9NQB0 619 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 WWOXQ9NZC7 414 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 PRPF4O43172 522 aaKnown RBP eCLIP12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 SERPINF2P08697 491 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 TPBGLP0DKB5 382 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 HOXB8P17481 243 aaPredicted RBP12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 ITGA9Q13797 1035 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 CAPSQ13938 189 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 PDPK2PQ6A1A2 396 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 ILDR2Q71H61 639 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 IQCKQ8N0W5 287 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 ART4Q93070 314 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 CPA4Q9UI42 421 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 EIF3LQ9Y262 564 aaKnown RBP12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 RAD54BQ9Y620 910 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 UMODL1Q5DID0 1318 aa12.17□□□□□ -0.46
DEPDC1-201ENST00000370966 SNX3O60493 162 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 RECQL4O94761 1208 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ITGAVP06756 1048 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 AVPR1AP37288 418 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 FAAP100Q0VG06 881 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 MFSD10Q14728 455 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 SLC45A4Q5BKX6 768 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 HGSNATQ68CP4 663 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 SNX31Q8N9S9 440 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 SERPINB11Q96P15 392 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 CDK5RAP1Q96SZ6 601 aaKnown RBP12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 CCT7Q99832 543 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 SH3GL3Q99963 347 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 IL1RL2Q9HB29 575 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 NT5MQ9NPB1 228 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms