RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 PHLPP2Q6ZVD8 1323 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SMCO2A6NFE2 343 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ACKR2O00590 384 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 PJA2O43164 708 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 PEX1O43933 1283 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 EFCAB14O75071 495 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ATP5BP06576 529 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 TIMP2P16035 220 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 EEF1GP26641 437 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 ADSLP30566 484 aaPredicted RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 CCR1P32246 355 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CPT1AP50416 773 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 MMP16P51512 607 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 PHC1P78364 1004 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 MRPS5P82675 430 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 MC1RQ01726 317 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CREB5Q02930 508 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 DLGAP5Q15398 846 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 FAM187BQ17R55 369 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 DPCR1Q3MIW9 517 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SNAP47Q5SQN1 464 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ACAD10Q6JQN1 1059 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 MFSD5Q6N075 450 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 KIAA1161Q6NSJ0 714 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CAVIN1Q6NZI2 390 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 FAM47EQ6ZV65 393 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 TRIM59Q8IWR1 403 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CELF5Q8N6W0 485 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 FSIP1Q8NA03 581 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 TRIM58Q8NG06 486 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CHURC1Q8WUH1 139 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 C1GALT1C1Q96EU7 318 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 DTNBP1Q96EV8 351 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 IFT43Q96FT9 208 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 FNBP1Q96RU3 617 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 PAIP1Q9H074 479 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.11□□□□□ -1.75
MCF2-203ENST00000370576 FAM204AQ9H8W3 233 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 L2HGDHQ9H9P8 463 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CERS4Q9HA82 394 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 C17orf75Q9HAS0 396 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ADPRHL2Q9NX46 363 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 LMCD1Q9NZU5 365 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 KIF17Q9P2E2 1029 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SUFUQ9UMX1 484 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 EDARQ9UNE0 448 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 COQ4Q9Y3A0 265 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 Q9Y3F1 56 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 MUC22E2RYF6 1773 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 SYCE3A1L190 88 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 A4D1N5 150 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 NT5C1B-RDH14C9J2C7 533 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 EREGO14944 169 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 DLX3O60479 287 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 LILRB5O75023 590 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ITPKAP23677 461 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 STAT2P52630 851 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ITGA8P53708 1063 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 PPP2R2AP63151 447 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 LRRC63Q05C16 580 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 EPS8Q12929 822 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CHIT1Q13231 466 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 SUZ12Q15022 739 aaKnown RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 POLD3Q15054 466 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 PGM5Q15124 567 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 EPHA7Q15375 998 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ANO6Q4KMQ2 910 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 DCAF15Q66K64 600 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 MTFR2Q6P444 385 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ANGPTL8Q6UXH0 198 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 USP45Q70EL2 814 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CD302Q8IX05 232 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 DAW1Q8N136 415 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 NUP93Q8N1F7 819 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 GALNT4Q8N4A0 578 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ACER1Q8TDN7 264 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 SYTL5Q8TDW5 730 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 KRT35Q92764 455 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 AHCYL2Q96HN2 611 aaKnown RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 CNTNAP3BQ96NU0 1288 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CDC6Q99741 560 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CNTNAP3Q9BZ76 1288 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 GLIS2Q9BZE0 524 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 NOL6Q9H6R4 1146 aaKnown RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 UCK1Q9HA47 277 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 PXMP2Q9NR77 195 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 C14orf119Q9NWQ9 140 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 MYO1AQ9UBC5 1043 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CNOT7Q9UIV1 285 aaKnown RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 BAG5Q9UL15 447 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ANGPTL3Q9Y5C1 460 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 PCDHA5Q9Y5H7 936 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 TDRD15B5MCY1 1934 aaKnown RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 ASTN2O75129 1339 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 SYNGAP1Q96PV0 1343 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 A0A088AWK7 358 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 SGK1O00141 431 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 TLR2O60603 784 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 DXOO77932 396 aaKnown RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 RTN3O95197 1032 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms