RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 OLIG1Q8TAK6 271 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 FAM3CQ92520 227 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 EXOC4Q96A65 974 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 SELENOOQ9BVL4 669 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 DEF6Q9H4E7 631 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 LTB4R2Q9NPC1 389 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 SPHK2Q9NRA0 654 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 RRN3Q9NYV6 651 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 TAS2R14Q9NYV8 317 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 AGO1Q9UL18 857 aaKnown RBP15.45■□□□□ 0.06
COL9A1-204ENST00000370496 ANKRD62A6NC57 917 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 AKR1B15C9JRZ8 316 aaPredicted RBP15.44■□□□□ 0.06
COL9A1-204ENST00000370496 DDX3XO00571 662 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL9A1-204ENST00000370496 MOCS2O96007 188 aaPredicted RBP15.44■□□□□ 0.06
COL9A1-204ENST00000370496 IGLV3-25P01717 112 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 IGLV3-27P01718 113 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 KLKB1P03952 638 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 GJA4P35212 333 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 FLT3P36888 993 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 ADKP55263 362 aaKnown RBP15.44■□□□□ 0.06
COL9A1-204ENST00000370496 GSCP56915 257 aaPredicted RBP15.44■□□□□ 0.06
COL9A1-204ENST00000370496 PITX1P78337 314 aaPredicted RBP15.44■□□□□ 0.06
COL9A1-204ENST00000370496 PTP4A2Q12974 167 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 NME3Q13232 169 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 ANO4Q32M45 955 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 LY6G5CQ5SRR4 150 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 TPGS1Q6ZTW0 290 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 BMP8AQ7Z5Y6 402 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 MCOLN2Q8IZK6 566 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 PJA1Q8NG27 643 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 RNF34Q969K3 372 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 TRIM11Q96F44 468 aa15.44■□□□□ 0.06
COL9A1-204ENST00000370496 DDX23Q9BUQ8 820 aaKnown RBP15.44■□□□□ 0.06
COL9A1-204ENST00000370496 NEDD8-MDP1E9PL57 170 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 M0QYT0 321 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 LATS1O95835 1130 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 TARSP26639 723 aaKnown RBP15.43■□□□□ 0.06
COL9A1-204ENST00000370496 HNRNPH3P31942 346 aaKnown RBP15.43■□□□□ 0.06
COL9A1-204ENST00000370496 CHKAP35790 457 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 SLC11A2P49281 568 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 GAD2Q05329 585 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 PON2Q15165 354 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 ASTLQ6HA08 431 aaPredicted RBP15.43■□□□□ 0.06
COL9A1-204ENST00000370496 TXNDC11Q6PKC3 985 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 SND1Q7KZF4 910 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL9A1-204ENST00000370496 DRC7Q8IY82 874 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 ADGRG2Q8IZP9 1017 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 EMC1Q8N766 993 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 BHMTQ93088 406 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 ZNF653Q96CK0 615 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 FCRL2Q96LA5 508 aaPredicted RBP15.43■□□□□ 0.06
COL9A1-204ENST00000370496 MCEEQ96PE7 176 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 BBS2Q9BXC9 721 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 ARHGAP20Q9P2F6 1191 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 ADAMTS1Q9UHI8 967 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 TMEM59LQ9UK28 342 aa15.43■□□□□ 0.06
COL9A1-204ENST00000370496 MYOFQ9NZM1 2061 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 HOXC11O43248 304 aaPredicted RBP15.42■□□□□ 0.06
COL9A1-204ENST00000370496 ATMINO43313 823 aaPredicted RBP15.42■□□□□ 0.06
COL9A1-204ENST00000370496 RTN2O75298 545 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 GJB6O95452 261 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 CYBBP04839 570 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 SLC2A3P11169 496 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 KRT3P12035 628 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 GZMAP12544 262 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 AOC1P19801 751 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 RRM1P23921 792 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 SDC4P31431 198 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 CCR1P32246 355 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 TBX2Q13207 712 aaPredicted RBP15.42■□□□□ 0.06
COL9A1-204ENST00000370496 ARID5BQ14865 1188 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 ZC3H12AQ5D1E8 599 aaKnown RBP15.42■□□□□ 0.06
COL9A1-204ENST00000370496 RHBDF2Q6PJF5 856 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 TMEM25Q86YD3 366 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 CCDC105Q8IYK2 499 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 CD101Q93033 1021 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 CFAP57Q96MR6 1250 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 TBCBQ99426 244 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 P2RY13Q9BPV8 354 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 LRFN3Q9BTN0 628 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 SIT1Q9Y3P8 196 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 PAXBP1Q9Y5B6 917 aa15.42■□□□□ 0.06
COL9A1-204ENST00000370496 FAM170BA6NMN3 283 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.41■□□□□ 0.06
COL9A1-204ENST00000370496 NCAM2O15394 837 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 FTLP02792 175 aaPredicted RBP15.41■□□□□ 0.06
COL9A1-204ENST00000370496 DESP17661 470 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 ABCB4P21439 1286 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 EIF4A3P38919 411 aaKnown RBP15.41■□□□□ 0.06
COL9A1-204ENST00000370496 CLCN5P51795 746 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 DEUP1Q05D60 604 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 KDSRQ06136 332 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 GRSF1Q12849 480 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL9A1-204ENST00000370496 LRRC32Q14392 662 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 CDO1Q16878 200 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 SLC25A52Q3SY17 297 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 OTUD1Q5VV17 481 aaPredicted RBP15.41■□□□□ 0.06
COL9A1-204ENST00000370496 DCUN1D2Q6PH85 259 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 ARCQ7LC44 396 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 DNAAF5Q86Y56 855 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms