RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 APOA1P02647 267 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 AMPD1P23109 780 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 RRM2P31350 389 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 FEN1P39748 380 aaKnown RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 SCNN1GP51170 649 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 NFE2Q16621 373 aaPredicted RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 EFL1Q7Z2Z2 1120 aaKnown RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 ARHGEF19Q8IW93 802 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 CASP10Q92851 521 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 TMEM159Q96B96 161 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 MYOCQ99972 504 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 BBS2Q9BXC9 721 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 SHOC2Q9UQ13 582 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 ABCA9Q8IUA7 1624 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 TNS2Q63HR2 1409 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 CFAP73A6NFT4 308 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 BAIAP3O94812 1187 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 FYNP06241 537 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 NFYCQ13952 458 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 FBXL19Q6PCT2 694 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 LRIG3Q6UXM1 1119 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 USP50Q70EL3 339 aaPredicted RBP8.77□□□□□ -1
ABCA4-201ENST00000370225 LUZP2Q86TE4 346 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 C4orf19Q8IY42 314 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 TMEM245Q9H330 911 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 LRRC40Q9H9A6 602 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 KLC4Q9NSK0 619 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 SLC27A5Q9Y2P5 690 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 DIP2BQ9P265 1576 aa8.77□□□□□ -1
ABCA4-201ENST00000370225 INO80Q9ULG1 1556 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 E9PBE3 544 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 RBAK-RBAKDNI3L0D1 243 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 KLHL41O60662 606 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 AKAP3O75969 853 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 ATP6V1B2P21281 511 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 CLK1P49759 484 aaKnown RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 XRCC4Q13426 336 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 SHROOM1Q2M3G4 852 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 HELQQ8TDG4 1101 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 CERS4Q9HA82 394 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 GTF3C4Q9UKN8 822 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 KIAA1257Q9ULG3 409 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 EIF2S1P05198 315 aaKnown RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 FMO4P31512 558 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 GSSP48637 474 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 ELAVL2Q12926 359 aaKnown RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 TRAPPC5Q8IUR0 188 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 TDRD5Q8NAT2 981 aaKnown RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 THAP11Q96EK4 314 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 CNPY3Q9BT09 278 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 EXO5Q9H790 373 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 ZNF711Q9Y462 761 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 GPSM3Q9Y4H4 160 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 PTPRMP28827 1452 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 MAP2P11137 1827 aaKnown RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 SETBP1Q9Y6X0 1596 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 CXCL11O14625 94 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 DAB1O75553 588 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 PPP1R37O75864 691 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 TOB1P50616 345 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 CCR4P51679 360 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 MRPS15P82914 257 aaKnown RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 DEFB115Q30KQ5 88 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 HLA-DQA1Q5Y7H0 255 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 TMEM199Q8N511 208 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 TRPC4APQ8TEL6 797 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 TPD52L3Q96J77 140 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 CAMKK2Q96RR4 588 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 KIAA1683Q9H0B3 1180 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 VTA1Q9NP79 307 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 IL17RBQ9NRM6 502 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 C16orf96A6NNT2 1141 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 LGALS2P05162 132 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 ZNF23P17027 643 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 ARMCX6Q7L4S7 300 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 SETD3Q86TU7 594 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 CYP4X1Q8N118 509 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 NOA1Q8NC60 698 aaKnown RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 SUSD6Q92537 303 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 USP6NLQ92738 828 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 PPP1R10Q96QC0 940 aaKnown RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 NLNQ9BYT8 704 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 TKTL2Q9H0I9 626 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 EHD4Q9H223 541 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 GEMIN8Q9NWZ8 242 aaKnown RBP8.77□□□□□ -1.01
ABCA4-201ENST00000370225 NR2E3Q9Y5X4 410 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 RASSF10A6NK89 507 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 HSD17B3P37058 310 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 NDUFV1P49821 464 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 PPATQ06203 517 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 RUNX1T1Q06455 604 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 ATP6AP1LQ52LC2 224 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 ZNF697Q5TEC3 545 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 SDHAF4Q5VUM1 108 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 CYP20A1Q6UW02 462 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 SV2AQ7L0J3 742 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 GATAD2AQ86YP4 633 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 ISCUQ9H1K1 167 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 TBC1D13Q9NVG8 400 aa8.77□□□□□ -1.01
ABCA4-201ENST00000370225 DLC1Q96QB1 1528 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms