RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 CDC40O60508 579 aaKnown RBP eCLIP8.79□□□□□ -1
LCA5-201ENST00000369846 GRAP2O75791 330 aa8.79□□□□□ -1
LCA5-201ENST00000369846 FDPSP14324 419 aaKnown RBP8.79□□□□□ -1
LCA5-201ENST00000369846 ATF6P18850 670 aa8.79□□□□□ -1
LCA5-201ENST00000369846 TKTP29401 623 aaKnown RBP8.79□□□□□ -1
LCA5-201ENST00000369846 RPA3P35244 121 aaPredicted RBP8.79□□□□□ -1
LCA5-201ENST00000369846 GP5P40197 560 aa8.79□□□□□ -1
LCA5-201ENST00000369846 AUHQ13825 339 aaKnown RBP8.79□□□□□ -1
LCA5-201ENST00000369846 TIMM50Q3ZCQ8 353 aa8.79□□□□□ -1
LCA5-201ENST00000369846 SLFN12LQ6IEE8 588 aa8.79□□□□□ -1
LCA5-201ENST00000369846 ENOSF1Q7L5Y1 443 aa8.79□□□□□ -1
LCA5-201ENST00000369846 HELQQ8TDG4 1101 aa8.79□□□□□ -1
LCA5-201ENST00000369846 SEMA4DQ92854 862 aa8.79□□□□□ -1
LCA5-201ENST00000369846 KATNAL1Q9BW62 490 aa8.79□□□□□ -1
LCA5-201ENST00000369846 SPATA16Q9BXB7 569 aa8.79□□□□□ -1
LCA5-201ENST00000369846 UNKQ9C0B0 810 aaKnown RBP8.79□□□□□ -1
LCA5-201ENST00000369846 ZFYVE28Q9HCC9 887 aa8.79□□□□□ -1
LCA5-201ENST00000369846 THAP1Q9NVV9 213 aa8.79□□□□□ -1
LCA5-201ENST00000369846 CMTM6Q9NX76 183 aa8.79□□□□□ -1
LCA5-201ENST00000369846 DPP3Q9NY33 737 aa8.79□□□□□ -1
LCA5-201ENST00000369846 LIMD1Q9UGP4 676 aa8.79□□□□□ -1
LCA5-201ENST00000369846 CDH9Q9ULB4 789 aa8.79□□□□□ -1
LCA5-201ENST00000369846 AKT3Q9Y243 479 aa8.79□□□□□ -1
LCA5-201ENST00000369846 GSTM1P09488 218 aa8.79□□□□□ -1
LCA5-201ENST00000369846 IDH2P48735 452 aaKnown RBP8.79□□□□□ -1
LCA5-201ENST00000369846 PRIM2P49643 509 aa8.79□□□□□ -1
LCA5-201ENST00000369846 ATN1P54259 1190 aaPredicted RBP8.79□□□□□ -1
LCA5-201ENST00000369846 EPS8Q12929 822 aa8.79□□□□□ -1
LCA5-201ENST00000369846 MADCAM1Q13477 382 aa8.79□□□□□ -1
LCA5-201ENST00000369846 PPM1LQ5SGD2 360 aa8.79□□□□□ -1
LCA5-201ENST00000369846 TMEM26Q6ZUK4 368 aa8.79□□□□□ -1
LCA5-201ENST00000369846 TTC30AQ86WT1 665 aa8.79□□□□□ -1
LCA5-201ENST00000369846 EPHX4Q8IUS5 362 aa8.79□□□□□ -1
LCA5-201ENST00000369846 CD302Q8IX05 232 aa8.79□□□□□ -1
LCA5-201ENST00000369846 EID3Q8N140 333 aa8.79□□□□□ -1
LCA5-201ENST00000369846 CACTIN-AS1Q8N1I8 211 aa8.79□□□□□ -1
LCA5-201ENST00000369846 TTC30BQ8N4P2 665 aa8.79□□□□□ -1
LCA5-201ENST00000369846 NSUN6Q8TEA1 469 aaKnown RBP8.79□□□□□ -1
LCA5-201ENST00000369846 DLG3Q92796 817 aa8.79□□□□□ -1
LCA5-201ENST00000369846 VPS33AQ96AX1 596 aa8.79□□□□□ -1
LCA5-201ENST00000369846 MNTQ99583 582 aa8.79□□□□□ -1
LCA5-201ENST00000369846 TMEM121Q9BTD3 319 aa8.79□□□□□ -1
LCA5-201ENST00000369846 WDR41Q9HAD4 459 aa8.79□□□□□ -1
LCA5-201ENST00000369846 NINJ2Q9NZG7 142 aa8.79□□□□□ -1
LCA5-201ENST00000369846 CD274Q9NZQ7 290 aa8.79□□□□□ -1
LCA5-201ENST00000369846 PFDN2Q9UHV9 154 aa8.79□□□□□ -1
LCA5-201ENST00000369846 STAP1Q9ULZ2 295 aa8.79□□□□□ -1
LCA5-201ENST00000369846 LOC110117498-PIK3R3F6TDL0 507 aa8.79□□□□□ -1
LCA5-201ENST00000369846 hCG_1984214I3L0E3 225 aa8.79□□□□□ -1
LCA5-201ENST00000369846 PRKD3O94806 890 aa8.79□□□□□ -1
LCA5-201ENST00000369846 IL2RBP14784 551 aa8.79□□□□□ -1
LCA5-201ENST00000369846 RPS7P62081 194 aaKnown RBP8.79□□□□□ -1
LCA5-201ENST00000369846 SURF1Q15526 300 aa8.79□□□□□ -1
LCA5-201ENST00000369846 EDRF1Q3B7T1 1238 aa8.79□□□□□ -1
LCA5-201ENST00000369846 PYDC2Q56P42 97 aa8.79□□□□□ -1
LCA5-201ENST00000369846 PKN3Q6P5Z2 889 aa8.79□□□□□ -1
LCA5-201ENST00000369846 MYO1HQ8N1T3 1032 aa8.79□□□□□ -1
LCA5-201ENST00000369846 ZNF713Q8N859 430 aaPredicted RBP8.79□□□□□ -1
LCA5-201ENST00000369846 MINDY2Q8NBR6 621 aa8.79□□□□□ -1
LCA5-201ENST00000369846 PHC3Q8NDX5 983 aa8.79□□□□□ -1
LCA5-201ENST00000369846 SYN2Q92777 582 aaPredicted RBP8.79□□□□□ -1
LCA5-201ENST00000369846 GTF2A1LQ9UNN4 478 aa8.79□□□□□ -1
LCA5-201ENST00000369846 RPL26L1Q9UNX3 145 aaKnown RBP8.79□□□□□ -1
LCA5-201ENST00000369846 PCDHGC5Q9Y5F6 944 aa8.79□□□□□ -1
LCA5-201ENST00000369846 IGSF1Q8N6C5 1336 aa8.78□□□□□ -1
LCA5-201ENST00000369846 FAM240BA0A1B0GVZ2 78 aa8.78□□□□□ -1
LCA5-201ENST00000369846 TYW5A2RUC4 315 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 MOCS2O96007 188 aaPredicted RBP8.78□□□□□ -1
LCA5-201ENST00000369846 MSL3P1P0C860 447 aa8.78□□□□□ -1
LCA5-201ENST00000369846 OLR1P78380 273 aa8.78□□□□□ -1
LCA5-201ENST00000369846 PGS1Q32NB8 556 aa8.78□□□□□ -1
LCA5-201ENST00000369846 SLC27A3Q5K4L6 730 aa8.78□□□□□ -1
LCA5-201ENST00000369846 SAMD4BQ5PRF9 694 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 N4BP2L1Q5TBK1 243 aaPredicted RBP8.78□□□□□ -1
LCA5-201ENST00000369846 TTC23Q5W5X9 447 aa8.78□□□□□ -1
LCA5-201ENST00000369846 PDXDC2PQ6P474 469 aa8.78□□□□□ -1
LCA5-201ENST00000369846 EFL1Q7Z2Z2 1120 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 RBM12BQ8IXT5 1001 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 SPON2Q9BUD6 331 aa8.78□□□□□ -1
LCA5-201ENST00000369846 PDCD10Q9BUL8 212 aa8.78□□□□□ -1
LCA5-201ENST00000369846 MOV10Q9HCE1 1003 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 SH3GLB2Q9NR46 395 aa8.78□□□□□ -1
LCA5-201ENST00000369846 FAM49BQ9NUQ9 324 aa8.78□□□□□ -1
LCA5-201ENST00000369846 COMMD8Q9NX08 183 aa8.78□□□□□ -1
LCA5-201ENST00000369846 TMCC3Q9ULS5 477 aa8.78□□□□□ -1
LCA5-201ENST00000369846 RUVBL2Q9Y230 463 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 SIK3Q9Y2K2 1263 aa8.78□□□□□ -1
LCA5-201ENST00000369846 SERPINA1P01009 418 aa8.78□□□□□ -1
LCA5-201ENST00000369846 APOA4P06727 396 aa8.78□□□□□ -1
LCA5-201ENST00000369846 ABL2P42684 1182 aa8.78□□□□□ -1
LCA5-201ENST00000369846 ALDH6A1Q02252 535 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 TAP1Q03518 808 aa8.78□□□□□ -1
LCA5-201ENST00000369846 MSLNQ13421 630 aaPredicted RBP8.78□□□□□ -1
LCA5-201ENST00000369846 SNX17Q15036 470 aa8.78□□□□□ -1
LCA5-201ENST00000369846 SHROOM1Q2M3G4 852 aaPredicted RBP8.78□□□□□ -1
LCA5-201ENST00000369846 TSGA10IPQ3SY00 556 aa8.78□□□□□ -1
LCA5-201ENST00000369846 USP39Q53GS9 565 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 CCSAPQ6IQ19 270 aaPredicted RBP8.78□□□□□ -1
LCA5-201ENST00000369846 DNAJC14Q6Y2X3 702 aaPredicted RBP8.78□□□□□ -1
LCA5-201ENST00000369846 ANKRD23Q86SG2 305 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms