RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 HMGCRP04035 888 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 KRT19P08727 400 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 SFNP31947 248 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 MRPS22P82650 360 aaKnown RBP12.69□□□□□ -0.38
PHGDH-201ENST00000369407 BAATQ14032 418 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-201ENST00000369407 MBLAC2Q68D91 279 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 NIPA2Q8N8Q9 360 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 UBA3Q8TBC4 463 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 DGCR14Q96DF8 476 aaKnown RBP12.69□□□□□ -0.38
PHGDH-201ENST00000369407 MIS12Q9H081 205 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 PXMP2Q9NR77 195 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 TMOD2Q9NZR1 351 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 EMCNQ9ULC0 261 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 TMCO1Q9UM00 188 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 CFLARO15519 480 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 TRUB2O95900 331 aaKnown RBP12.69□□□□□ -0.38
PHGDH-201ENST00000369407 FGF3P11487 239 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-201ENST00000369407 SERPINB5P36952 375 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 PDK1Q15118 436 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 CNGA3Q16281 694 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 NIPA1Q7RTP0 329 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 HACE1Q8IYU2 909 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 MCPH1Q8NEM0 835 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 HMGXB4Q9UGU5 601 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 TPP1O14773 563 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 ZBTB14O43829 449 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 PEX1O43933 1283 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 METTL18O95568 372 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 CRHR1P34998 444 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 PKNOX1P55347 436 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 TRPC3Q13507 836 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 NOMO1Q15155 1222 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 EML3Q32P44 896 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 PPM1LQ5SGD2 360 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 FAM102AQ5T9C2 384 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-201ENST00000369407 PGM2L1Q6PCE3 622 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 CES3Q6UWW8 571 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 TNS4Q8IZW8 715 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 USP13Q92995 863 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-201ENST00000369407 CLMNQ96JQ2 1002 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 TDRKHQ9Y2W6 561 aaKnown RBP12.69□□□□□ -0.38
PHGDH-201ENST00000369407 AFG3L2Q9Y4W6 797 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 KLRG2A4D1S0 409 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-201ENST00000369407 DNAJA2O60884 412 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 LSM8O95777 96 aaKnown RBP12.68□□□□□ -0.38
PHGDH-201ENST00000369407 ZBED1O96006 694 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 ABCG1P45844 678 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 TGFB2P61812 414 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 ITGA9Q13797 1035 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 ADGRG6Q86SQ4 1221 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 MCF2L2Q86YR7 1114 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 FBXW8Q8N3Y1 598 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 PRPF31Q8WWY3 499 aaKnown RBP12.68□□□□□ -0.38
PHGDH-201ENST00000369407 ATP6V0A1Q93050 837 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 COPS7BQ9H9Q2 264 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-201ENST00000369407 PDLIM7Q9NR12 457 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
PHGDH-201ENST00000369407 SMIM31A0A1B0GVY4 71 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 H3BSA7 217 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 NEMP1O14524 444 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 CRTAMO95727 393 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 NPR1P16066 1061 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 TCN1P20061 433 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-201ENST00000369407 HPCAP84074 193 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 SNAPC2Q13487 334 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 KRT81Q14533 505 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 B3GNT6Q6ZMB0 384 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 XYLT1Q86Y38 959 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 UBR7Q8N806 425 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 CMASQ8NFW8 434 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-201ENST00000369407 ACTRT2Q8TDY3 377 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 CCDC28BQ9BUN5 200 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 NIF3L1Q9GZT8 377 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 CTDP1Q9Y5B0 961 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-201ENST00000369407 PSAT1Q9Y617 370 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 SCN9AQ15858 1988 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 SLX4Q8IY92 1834 aa12.68□□□□□ -0.38
PHGDH-201ENST00000369407 CHADO15335 359 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 KLHL2O95198 593 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 SRGAP2CP0DJJ0 459 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 SRGAP2BP0DMP2 458 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 PRKCHP24723 683 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 COG7P83436 770 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 CYTH1Q15438 398 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 TBCCQ15814 346 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 ZNF699Q32M78 642 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 TRNP1Q6NT89 227 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 PTAR1Q7Z6K3 402 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-201ENST00000369407 AMIGO2Q86SJ2 522 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 TWNKQ96RR1 684 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 SORT1Q99523 831 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 MRPL1Q9BYD6 325 aaKnown RBP12.67□□□□□ -0.38
PHGDH-201ENST00000369407 CEP41Q9BYV8 373 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 C17orf75Q9HAS0 396 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 AP4B1Q9Y6B7 739 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 A0A0J9YVX5 310 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 WDR27A2RRH5 827 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 TMCC1O94876 653 aa12.67□□□□□ -0.38
PHGDH-201ENST00000369407 PENKP01210 267 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-201ENST00000369407 AMHP03971 560 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms