RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 EPHB3P54753 998 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 CDH6P55285 790 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 C1DQ13901 141 aaKnown RBP10.35□□□□□ -0.75
SIM1-202ENST00000369208 BNC2Q6ZN30 1099 aaPredicted RBP10.35□□□□□ -0.75
SIM1-202ENST00000369208 RFX8Q6ZV50 586 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 HES6Q96HZ4 224 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 MTMR9Q96QG7 549 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 VPS11Q9H270 941 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 FBXL21Q9UKT6 434 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 CDYLQ9Y232 598 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 KCNK1O00180 336 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 WARSP23381 471 aaKnown RBP10.35□□□□□ -0.75
SIM1-202ENST00000369208 NAMPTP43490 491 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 TWF1Q12792 350 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 PDIA6Q15084 440 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 LAYNQ6UX15 382 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 LRRC17Q8N6Y2 441 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 ZNF557Q8N988 423 aaPredicted RBP10.35□□□□□ -0.75
SIM1-202ENST00000369208 PACSIN1Q9BY11 444 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 AGAP1Q9UPQ3 857 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 ZMYM2Q9UBW7 1377 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 THOP1P52888 689 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 SLC9A4Q6AI14 798 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 FAM117BQ6P1L5 589 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 IFNL1Q8IU54 200 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 KBTBD8Q8NFY9 601 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 SYN2Q92777 582 aaPredicted RBP10.35□□□□□ -0.75
SIM1-202ENST00000369208 NT5C1AQ9BXI3 368 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 RUBCNLQ9H714 662 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 TRPM1Q7Z4N2 1603 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 RHOBTB3O94955 611 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 DPYSQ14117 519 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 WDR72Q3MJ13 1102 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 BNIPLQ7Z465 357 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 ZC3H10Q96K80 434 aaKnown RBP10.35□□□□□ -0.75
SIM1-202ENST00000369208 LATS2Q9NRM7 1088 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 MSRAQ9UJ68 235 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 ABCG2Q9UNQ0 655 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 SKP1P63208 163 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 PLCL1Q15111 1095 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 OXCT2Q9BYC2 517 aaPredicted RBP10.35□□□□□ -0.75
SIM1-202ENST00000369208 KLHL11Q9NVR0 708 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 TAS2R1Q9NYW7 299 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 PHF24Q9UPV7 400 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 GIT1Q9Y2X7 761 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 PCDHB6Q9Y5E3 794 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 ARHGEF40Q8TER5 1519 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 C2orf74A8MZ97 194 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 B3GALNT1O75752 331 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 SRP72O76094 671 aaKnown RBP10.35□□□□□ -0.75
SIM1-202ENST00000369208 ASLP04424 464 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 ALOX12P18054 663 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 PRKACBP22694 351 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 ACLYP53396 1101 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 ACTR2P61160 394 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 COX10Q12887 443 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 RASA2Q15283 850 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 CCDC60Q8IWA6 550 aaPredicted RBP10.35□□□□□ -0.75
SIM1-202ENST00000369208 USP38Q8NB14 1042 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 TAMM41Q96BW9 452 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 PLA2G12BQ9BX93 195 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 ZNF224Q9NZL3 707 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 MAD2L2Q9UI95 211 aa10.35□□□□□ -0.75
SIM1-202ENST00000369208 PDGFRBP09619 1106 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 CLUP10909 449 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 ZNF484Q5JVG2 852 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 C12orf60Q5U649 245 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 ABRAXAS1Q6UWZ7 409 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 ZBTB49Q6ZSB9 765 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 HERC6Q8IVU3 1022 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 AP3S1Q92572 193 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 PGM2Q96G03 612 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 C17orf75Q9HAS0 396 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 STARD7Q9NQZ5 370 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 ARHGEF3Q9NR81 526 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 IGSF9BQ9UPX0 1349 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 XYLBO75191 536 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 THPOP40225 353 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 YAP1P46937 504 aaKnown RBP10.34□□□□□ -0.75
SIM1-202ENST00000369208 TARBP1Q13395 1621 aaKnown RBP10.34□□□□□ -0.75
SIM1-202ENST00000369208 SPHKAPQ2M3C7 1700 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 ALFQ53S48 1182 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 DHDDSQ86SQ9 333 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 SLC20A1Q8WUM9 679 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 SOCS4Q8WXH5 440 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 PREBQ9HCU5 417 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 RUVBL2Q9Y230 463 aaKnown RBP10.34□□□□□ -0.75
SIM1-202ENST00000369208 TMEM5Q9Y2B1 443 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 STON1Q9Y6Q2 735 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 CNTNAP4Q9C0A0 1308 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 TRIM49BA6NDI0 452 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 TRIM49D1C9J1S8 452 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 ZSCAN9O15535 394 aaPredicted RBP10.34□□□□□ -0.75
SIM1-202ENST00000369208 YES1P07947 543 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 ERP29P30040 261 aaKnown RBP10.34□□□□□ -0.75
SIM1-202ENST00000369208 GRK3P35626 688 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 CASP4P49662 377 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 FASTKD1Q53R41 847 aaKnown RBP10.34□□□□□ -0.75
SIM1-202ENST00000369208 TCEAL7Q9BRU2 100 aa10.34□□□□□ -0.75
SIM1-202ENST00000369208 DCUN1D5Q9BTE7 237 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms