RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ZBTB37Q5TC79 503 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 PAPD7Q5XG87 772 aaKnown RBP9.23□□□□□ -0.93
TPM3-213ENST00000368545 ZC3H14Q6PJT7 736 aaKnown RBP9.23□□□□□ -0.93
TPM3-213ENST00000368545 TMEM270Q6UE05 265 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 TRIM72Q6ZMU5 477 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 RHOT2Q8IXI1 618 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 MRPL41Q8IXM3 137 aaKnown RBP9.23□□□□□ -0.93
TPM3-213ENST00000368545 TTC39CQ8N584 583 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 MNS1Q8NEH6 495 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 BEST2Q8NFU1 509 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 GDPD5Q8WTR4 605 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 RIPOR3Q96MK2 946 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 NXF3Q9H4D5 531 aaKnown RBP9.23□□□□□ -0.93
TPM3-213ENST00000368545 CRTAC1Q9NQ79 661 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 DPP3Q9NY33 737 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 CDC23Q9UJX2 597 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 GRIN2DO15399 1336 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 UMODL1Q5DID0 1318 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 H3BNC9 293 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 RGS9O75916 674 aaPredicted RBP9.23□□□□□ -0.93
TPM3-213ENST00000368545 RECQL4O94761 1208 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 MMEP08473 750 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 BPIP17213 487 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 CHRNB2P17787 502 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 GBP1P32455 592 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 NTF4P34130 210 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 ASPAP45381 313 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 ZNF132P52740 706 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 RBP5P82980 135 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 AMPD2Q01433 879 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 MYO1EQ12965 1108 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 NKG7Q16617 165 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 WHAMMP3Q1A5X7 153 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 TAF3Q5VWG9 929 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 TWF2Q6IBS0 349 aaKnown RBP9.23□□□□□ -0.93
TPM3-213ENST00000368545 ALKAL1Q6UXT8 129 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 SYCE1Q8N0S2 351 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 CACTIN-AS1Q8N1I8 211 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 SVIPQ8NHG7 77 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 CXorf38Q8TB03 319 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 BTN2A2Q8WVV5 523 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 WNT8BQ93098 351 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 TRIM11Q96F44 468 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 KLHDC7BQ96G42 594 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 CCDC74BQ96LY2 380 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 RTKNQ9BST9 563 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 ZNF700Q9H0M5 742 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 CYP3A43Q9HB55 503 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 NOC2LQ9Y3T9 749 aaKnown RBP9.23□□□□□ -0.93
TPM3-213ENST00000368545 SQORQ9Y6N5 450 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 GOLGA6CA6NDK9 693 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 GOLGA6BA6NDN3 693 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 BUB1O43683 1085 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 DLGAP3O95886 979 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 CHRNA1P02708 482 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 GOLGA6DP0CG33 693 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 PRLRP16471 622 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 THPOP40225 353 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 CCL23P55773 120 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 XKR4Q5GH76 650 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 UBXN11Q5T124 520 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 LRRC52Q8N7C0 313 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 CEP112Q8N8E3 955 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 CISHQ9NSE2 258 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 GOLGA6AQ9NYA3 693 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 UBQLN1Q9UMX0 589 aaKnown RBP9.22□□□□□ -0.93
TPM3-213ENST00000368545 ST3GAL5Q9UNP4 418 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 IPPQ9Y573 584 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 SAR1BQ9Y6B6 198 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 TCRBV16S1A1N1A0A5B0 115 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 TMCO5BA8MYB1 307 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 DYNC1I1O14576 645 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 AXIN1O15169 862 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 EIF4EBP3O60516 100 aaPredicted RBP9.22□□□□□ -0.93
TPM3-213ENST00000368545 RFPL1O75677 317 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 PALMO75781 387 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 GJB5O95377 273 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 LMNAP02545 664 aaKnown RBP9.22□□□□□ -0.93
TPM3-213ENST00000368545 FTLP02792 175 aaPredicted RBP9.22□□□□□ -0.93
TPM3-213ENST00000368545 ATP1A1P05023 1023 aaKnown RBP9.22□□□□□ -0.93
TPM3-213ENST00000368545 KCNE1P15382 129 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 TCP1P17987 556 aaKnown RBP9.22□□□□□ -0.93
TPM3-213ENST00000368545 NOP2P46087 812 aaKnown RBP9.22□□□□□ -0.93
TPM3-213ENST00000368545 HADHBP55084 474 aaKnown RBP9.22□□□□□ -0.93
TPM3-213ENST00000368545 TNNC1P63316 161 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 TUBB4BP68371 445 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 GPC5P78333 572 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 DMWDQ09019 674 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 CLEC16AQ2KHT3 1053 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 GFOD2Q3B7J2 385 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 WDR72Q3MJ13 1102 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 SLC6A19Q695T7 634 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 FAM117BQ6P1L5 589 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 PALB2Q86YC2 1186 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 ADCY4Q8NFM4 1077 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 PTPRN2Q92932 1015 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 RMDN1Q96DB5 314 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 ASIC4Q96FT7 647 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 HPDLQ96IR7 371 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 THAP2Q9H0W7 228 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms