RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.06□□□□□ -0.64
TPM3-212ENST00000368533 NR2E3Q9Y5X4 410 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 F5H423 210 aaPredicted RBP11.05□□□□□ -0.64
TPM3-212ENST00000368533 SMAPO00193 183 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 USP17L7P0C7H9 530 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 LRPAP1P30533 357 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 SESN3P58005 492 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 TLE2Q04725 743 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 DCAF6Q58WW2 860 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 OLFML1Q6UWY5 402 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 LRRTM3Q86VH5 581 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 FAM131BQ86XD5 332 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 C12orf50Q8NA57 414 aaPredicted RBP11.05□□□□□ -0.64
TPM3-212ENST00000368533 OR10T2Q8NGX3 314 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 CCHCR1Q8TD31 782 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 ROPN1BQ9BZX4 212 aaPredicted RBP11.05□□□□□ -0.64
TPM3-212ENST00000368533 ROPN1Q9HAT0 212 aaPredicted RBP11.05□□□□□ -0.64
TPM3-212ENST00000368533 SAYSD1Q9NPB0 183 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 USP18Q9UMW8 372 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 C9IYK1 514 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 STAU1O95793 577 aaKnown RBP11.05□□□□□ -0.64
TPM3-212ENST00000368533 SELPP16109 830 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 GPD1P21695 349 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 BST2Q10589 180 aaKnown RBP11.05□□□□□ -0.64
TPM3-212ENST00000368533 PTK6Q13882 451 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 CCDC14Q49A88 953 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 SLC24A5Q71RS6 500 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 GALNT15Q8N3T1 639 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 ANKRD52Q8NB46 1076 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 RBM41Q96IZ5 413 aaKnown RBP11.05□□□□□ -0.64
TPM3-212ENST00000368533 TNIP3Q96KP6 325 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 FAM193BQ96PV7 902 aaPredicted RBP11.05□□□□□ -0.64
TPM3-212ENST00000368533 SLITRK1Q96PX8 696 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 RBM15Q96T37 977 aaKnown RBP eCLIP11.05□□□□□ -0.64
TPM3-212ENST00000368533 CFHR5Q9BXR6 569 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 HIPK3Q9H422 1215 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 VPS37BQ9H9H4 285 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 TBC1D13Q9NVG8 400 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 CHCHD3Q9NX63 227 aaKnown RBP11.05□□□□□ -0.64
TPM3-212ENST00000368533 NINJ2Q9NZG7 142 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 DNPEPQ9ULA0 475 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 RALGAPA2Q2PPJ7 1873 aa11.05□□□□□ -0.64
TPM3-212ENST00000368533 TDRD15B5MCY1 1934 aaKnown RBP11.05□□□□□ -0.64
TPM3-212ENST00000368533 PDCD11Q14690 1871 aaKnown RBP11.04□□□□□ -0.64
TPM3-212ENST00000368533 GOLGA8MH3BSY2 632 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 BCAT1P54687 386 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 CDH6P55285 790 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 ARHGEF6Q15052 776 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 PKDCCQ504Y2 493 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 C1orf228Q6PIY5 440 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 CLEC20AQ6ZU45 233 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 ZC3H18Q86VM9 953 aaKnown RBP11.04□□□□□ -0.64
TPM3-212ENST00000368533 TMEM173Q86WV6 379 aaPredicted RBP11.04□□□□□ -0.64
TPM3-212ENST00000368533 RFX6Q8HWS3 928 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 PYROXD2Q8N2H3 581 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 MYLPFQ96A32 169 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 MCRS1Q96EZ8 462 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 SERPINB12Q96P63 405 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 RTP3Q9BQQ7 232 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 LRRC4Q9HBW1 653 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 C2CD4BA6NLJ0 364 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 C2CD2LO14523 706 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 NRP1O14786 923 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 CST8O60676 142 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 SDC4P31431 198 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 TKTL1P51854 596 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 NKX3-2P78367 333 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 SLC6A3Q01959 620 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 SLC25A11Q02978 314 aaKnown RBP11.04□□□□□ -0.64
TPM3-212ENST00000368533 TUSC3Q13454 348 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 PIGHQ14442 188 aaPredicted RBP11.04□□□□□ -0.64
TPM3-212ENST00000368533 SYPL2Q5VXT5 272 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 SPOCD1Q6ZMY3 1216 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.04□□□□□ -0.642e-6■■□□□ 14.5
TPM3-212ENST00000368533 UNC93AQ86WB7 457 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 SCN4BQ8IWT1 228 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 SCAMP5Q8TAC9 235 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 FAM81AQ8TBF8 368 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.64
TPM3-212ENST00000368533 PGBD4Q96DM1 585 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 TMEM121Q9BTD3 319 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 ABI2Q9NYB9 513 aaPredicted RBP11.04□□□□□ -0.64
TPM3-212ENST00000368533 hCG_2014768A0A024R1R8 64 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 RASA4BC9J798 803 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 RASA4O43374 803 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 SPAG7O75391 227 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 ALADP13716 330 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 KRT15P19012 456 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 GPR15P49685 360 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 GPS1Q13098 491 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 LRRC23Q53EV4 343 aaPredicted RBP11.04□□□□□ -0.64
TPM3-212ENST00000368533 NOMO2Q5JPE7 1267 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 C1QTNF12Q5T7M4 302 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 OVOS1Q6IE37 1185 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 CD300LGQ6UXG3 332 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 PIGWQ7Z7B1 504 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 ZNF598Q86UK7 904 aaKnown RBP11.04□□□□□ -0.64
TPM3-212ENST00000368533 DEFB106AQ8N104 65 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 CYP4X1Q8N118 509 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 SIX6OS1Q8N1H7 587 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms