RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 RNASE9P60153 205 aaKnown RBP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 OTUD1Q5VV17 481 aaPredicted RBP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 TPGS1Q6ZTW0 290 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 MON1BQ7L1V2 547 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 PHF13Q86YI8 300 aaPredicted RBP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 IQCDQ96DY2 449 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 FCRL2Q96LA5 508 aaPredicted RBP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 SERPINB11Q96P15 392 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 TRIM62Q9BVG3 475 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 DCLK3Q9C098 648 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 METTL5Q9NRN9 209 aaKnown RBP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 DLGAP2Q9P1A6 1054 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 CALCOCO1Q9P1Z2 691 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 SYNJ2BP-COX16A0A087WUM0 186 aa15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 TMCO5BA8MYB1 307 aa15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 DDX3XO00571 662 aaKnown RBP eCLIP15.7■□□□□ 0.15e-7■■■■□ 23
SMPDL3A-201ENST00000368440 IRAK2O43187 625 aa15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 FLT3P36888 993 aa15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 MESP2Q0VG99 397 aa15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 NR1H3Q13133 447 aa15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 EIF4EBP2Q13542 120 aaPredicted RBP15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 SLC39A13Q96H72 371 aa15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 RBM12Q9NTZ6 932 aaKnown RBP15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 ADAM22Q9P0K1 906 aa15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 COX16Q9P0S2 106 aa15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 TMEM59LQ9UK28 342 aa15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 TLR6Q9Y2C9 796 aa15.7■□□□□ 0.1
SMPDL3A-201ENST00000368440 ADH1CP00326 375 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 SCNN1AP37088 669 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 SLC6A11P48066 632 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 HARS2P49590 506 aaKnown RBP15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 GALK1P51570 392 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 TDRD12Q587J7 1177 aaKnown RBP15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 FSTL4Q6MZW2 842 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 EMC1Q8N766 993 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 NAT16Q8N8M0 369 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 SYN2Q92777 582 aaPredicted RBP15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 BHMTQ93088 406 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 NUCKS1Q9H1E3 243 aaKnown RBP15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 FAM204AQ9H8W3 233 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 ZNF510Q9Y2H8 683 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 MRPS17Q9Y2R5 130 aaKnown RBP15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 ZDBF2Q9HCK1 2354 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 F5P12259 2224 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 WDFY4Q6ZS81 3184 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 TRDMT1O14717 391 aaKnown RBP15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 CHRNB1P11230 501 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 NOS2P35228 1153 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 MATKP42679 507 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 CDK17Q00537 523 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 RING1Q06587 406 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 NNTQ13423 1086 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 ANO4Q32M45 955 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 TMEM196Q5HYL7 178 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 ACAD10Q6JQN1 1059 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 TMC6Q7Z403 805 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 FAM217AQ8IXS0 508 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 JOSD2Q8TAC2 188 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 EZH1Q92800 747 aaPredicted RBP15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 CD101Q93033 1021 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 P2RY13Q9BPV8 354 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 OSBPL6Q9BZF3 934 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 DDIT4Q9NX09 232 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 PLK2Q9NYY3 685 aa15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 XPO7Q9UIA9 1087 aaKnown RBP15.69■□□□□ 0.1
SMPDL3A-201ENST00000368440 GOLGA6L7A0A1B0GV03 622 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 NEDD8-MDP1E9PL57 170 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 HOXC11O43248 304 aaPredicted RBP15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 GSCP56915 257 aaPredicted RBP15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 GAD2Q05329 585 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 C1QBPQ07021 282 aaKnown RBP15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 TRIM14Q14142 442 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 ZC3H12AQ5D1E8 599 aaKnown RBP15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 C1orf228Q6PIY5 440 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 SFTPA1Q8IWL2 248 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 MCOLN2Q8IZK6 566 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 TBCBQ99426 244 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 NELL2Q99435 816 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 NPY6RQ99463 290 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 BBS2Q9BXC9 721 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 LMAN1LQ9HAT1 526 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 ARHGAP20Q9P2F6 1191 aa15.68■□□□□ 0.1
SMPDL3A-201ENST00000368440 TCRBV5S1A1TA0A578 114 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 ANTXRLA6NF34 631 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 M0QYT0 321 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 TRIM24O15164 1050 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 TSPAN3O60637 253 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 MOCS2O96007 188 aaPredicted RBP15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 EGFP01133 1207 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 SERPING1P05155 500 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 CALB1P05937 261 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 SLC6A4P31645 630 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 SULT1E1P49888 294 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 NME3Q13232 169 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 CCINQ13939 588 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 FAM133BQ5BKY9 247 aaKnown RBP15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 FYB2Q5VWT5 728 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 NUGGCQ68CJ6 796 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms