RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 BTBD19C9JJ37 291 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 VAV1P15498 845 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 EPHX2P34913 555 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 CLNS1AP54105 237 aaKnown RBP18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 BCAT1P54687 386 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 BST1Q10588 318 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 RFWD3Q6PCD5 774 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 DEFB106AQ8N104 65 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 GSDMBQ8TAX9 411 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 NUDCD1Q96RS6 583 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 ZNF180Q9UJW8 692 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 PIN4Q9Y237 131 aaKnown RBP18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 MTO1Q9Y2Z2 717 aaKnown RBP18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 DERAQ9Y315 318 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 WDR27A2RRH5 827 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 PEX11AO75192 247 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 KRT38O76015 456 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 CDC25CP30307 473 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 CDK16Q00536 496 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 CHI3L2Q15782 390 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 ALKAL1Q6UXT8 129 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 ALYREFQ86V81 257 aaKnown RBP18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 TMEM40Q8WWA1 233 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 CADM1Q9BY67 442 aaKnown RBP18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 CLDN5O00501 218 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 TRAFD1O14545 582 aaPredicted RBP18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 TKTP29401 623 aaKnown RBP18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 MAGEA3P43357 314 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 DCAF6Q58WW2 860 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 PDCD7Q8N8D1 485 aaKnown RBP18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 DEPDC1BQ8WUY9 529 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 DNAJB3Q8WWF6 145 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 ZNF570Q96NI8 536 aa18.7■□□□□ 0.58
UBQLN4-201ENST00000368309 SESN2P58004 480 aaPredicted RBP18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 SOX4Q06945 474 aaPredicted RBP18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 ANKRD20A2Q5SQ80 823 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 ANKRD20A1Q5TYW2 823 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 NUDCD3Q8IVD9 361 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 HTR3CQ8WXA8 447 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 LENG1Q96BZ8 264 aaPredicted RBP18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 OXNAD1Q96HP4 312 aaPredicted RBP18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 MAML3Q96JK9 1138 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 RNPEPL1Q9HAU8 725 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 SEPT10Q9P0V9 454 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 TGDSO95455 350 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 CYP2C9P11712 490 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 ACAT1P24752 427 aaKnown RBP18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 RABGGTBP53611 331 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 LDLRAD1Q5T700 205 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 ZCCHC23Q6ZST2 131 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 ARID3BQ8IVW6 561 aaPredicted RBP18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 TFB1MQ8WVM0 346 aaKnown RBP18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 E2F7Q96AV8 911 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 SKA1Q96BD8 255 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 LRRC39Q96DD0 335 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 NSL1Q96IY1 281 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 QKIQ96PU8 341 aaKnown RBP eCLIP18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 UBQLN1Q9UMX0 589 aaKnown RBP18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 CEP350Q5VT06 3117 aa18.69■□□□□ 0.58
UBQLN4-201ENST00000368309 ZFXP17010 805 aaPredicted RBP18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 IGFBP6P24592 240 aaPredicted RBP18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 NR2C2P49116 596 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 ADIGQ0VDE8 80 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 AP1B1Q10567 949 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 HIC1Q14526 733 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 NBPF20Q3BBV1 942 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 GPR142Q7Z601 462 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 PIGZQ86VD9 579 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 CRYBG2Q8N1P7 616 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 NMUR2Q9GZQ4 415 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 LNPEPQ9UIQ6 1025 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 FAM159BA6NKW6 160 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 I3L4J1 428 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 PIRO00625 290 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 SMIM10L2AP0DMW4 78 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 SMIM10L2BP0DMW5 78 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 DARSP14868 501 aaKnown RBP18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 ARL4AP40617 200 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 NDUFV1P49821 464 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 SULT1E1P49888 294 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 TP53INP2Q8IXH6 220 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 CCNYQ8ND76 341 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 APPL2Q8NEU8 664 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 PTCD3Q96EY7 689 aaKnown RBP18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 C20orf27Q9GZN8 174 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 IL1RAPL1Q9NZN1 696 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 PCDHA11Q9Y5I1 949 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 STRNO43815 780 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 CREB3O43889 395 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 CCDC22O60826 627 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 WFS1O76024 890 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 BEST1O76090 585 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 CALB2P22676 271 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 CPA2P48052 419 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 NAA25Q14CX7 972 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 COLGALT1Q8NBJ5 622 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 PGLYRP2Q96PD5 576 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 TINF2Q9BSI4 451 aa18.68■□□□□ 0.58
UBQLN4-201ENST00000368309 CCL15-CCL14A0A0B4J2E2 113 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms