RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 RNF25Q96BH1 459 aaPredicted RBP12.72□□□□□ -0.37
CAPN9-203ENST00000366666 LRRC1Q9BTT6 524 aa12.72□□□□□ -0.37
CAPN9-203ENST00000366666 FBXO44Q9H4M3 255 aa12.72□□□□□ -0.37
CAPN9-203ENST00000366666 ZNF334Q9HCZ1 680 aaPredicted RBP12.72□□□□□ -0.37
CAPN9-203ENST00000366666 HSFX1Q9UBD0 423 aa12.72□□□□□ -0.37
CAPN9-203ENST00000366666 FBXW11Q9UKB1 542 aa12.72□□□□□ -0.37
CAPN9-203ENST00000366666 NR2E1Q9Y466 385 aa12.72□□□□□ -0.37
CAPN9-203ENST00000366666 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
CAPN9-203ENST00000366666 LPXNO60711 386 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 CLASP2O75122 1294 aaKnown RBP12.71□□□□□ -0.37
CAPN9-203ENST00000366666 C8AP07357 584 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 RARAP10276 462 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 ADCY2Q08462 1091 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 CCDC181Q5TID7 509 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 BTBD8Q5XKL5 378 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 DNAJB7Q7Z6W7 309 aaPredicted RBP12.71□□□□□ -0.37
CAPN9-203ENST00000366666 TADA2BQ86TJ2 420 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 MON1AQ86VX9 555 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 ZDHHC14Q8IZN3 488 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 UBL4BQ8N7F7 174 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 GPATCH11Q8N954 259 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 DQX1Q8TE96 717 aaKnown RBP12.71□□□□□ -0.37
CAPN9-203ENST00000366666 HSPH1Q92598 858 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 GDAP1L1Q96MZ0 367 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 TTLL2Q9BWV7 592 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 EMILIN2Q9BXX0 1053 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 CCSER2Q9H7U1 834 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 WDR6Q9NNW5 1121 aaKnown RBP12.71□□□□□ -0.37
CAPN9-203ENST00000366666 STIM2Q9P246 746 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 SPTBN5Q9NRC6 3674 aaKnown RBP12.71□□□□□ -0.37
CAPN9-203ENST00000366666 EIF3HO15372 352 aaKnown RBP eCLIP12.71□□□□□ -0.37
CAPN9-203ENST00000366666 SART1O43290 800 aaKnown RBP12.71□□□□□ -0.37
CAPN9-203ENST00000366666 PSTPIP1O43586 416 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 RTN3O95197 1032 aaPredicted RBP12.71□□□□□ -0.37
CAPN9-203ENST00000366666 GLUD1P00367 558 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 PCK1P35558 622 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 RWDD2BP57060 319 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 CREMQ03060 361 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 RAB30Q15771 203 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 TMEM150AQ86TG1 271 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 GSPT2Q8IYD1 628 aaKnown RBP12.71□□□□□ -0.37
CAPN9-203ENST00000366666 SAMD11Q96NU1 681 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 ABCC13Q9NSE7 274 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 DDIT4Q9NX09 232 aa12.71□□□□□ -0.37
CAPN9-203ENST00000366666 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 C3orf70A6NLC5 250 aaPredicted RBP12.7□□□□□ -0.38
CAPN9-203ENST00000366666 CCL16O15467 120 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 ENDOD1O94919 500 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 ACAP1Q15027 740 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 ZNF697Q5TEC3 545 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 STRADAQ7RTN6 431 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 HS6ST3Q8IZP7 471 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 PYROXD2Q8N2H3 581 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 RUFY1Q96T51 708 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 SNRNP25Q9BV90 132 aaKnown RBP12.7□□□□□ -0.38
CAPN9-203ENST00000366666 CARD9Q9H257 536 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 HCFC1R1Q9NWW0 138 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 DMGDHQ9UI17 866 aaKnown RBP12.7□□□□□ -0.38
CAPN9-203ENST00000366666 PRRC2BQ5JSZ5 2229 aaKnown RBP12.7□□□□□ -0.38
CAPN9-203ENST00000366666 IGLV3-25P01717 112 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 FGGP02679 453 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 KRT1P04264 644 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 ZDHHC11BP0C7U3 371 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 CSH1P0DML2 217 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 CSH2P0DML3 217 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 RARGP13631 454 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 KRT10P13645 584 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 DEUP1Q05D60 604 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 MMRN1Q13201 1228 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 EIF4EBP2Q13542 120 aaPredicted RBP12.7□□□□□ -0.38
CAPN9-203ENST00000366666 ZFYVE27Q5T4F4 411 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 MFSD7Q6UXD7 560 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 KATNAL2Q8IYT4 538 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 RASGEF1CQ8N431 466 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 PSMG2Q969U7 264 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 TIFAQ96CG3 184 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 MYRFLQ96LU7 910 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 ZNF512Q96ME7 567 aaPredicted RBP12.7□□□□□ -0.38
CAPN9-203ENST00000366666 HEMGNQ9BXL5 484 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 AP1M1Q9BXS5 423 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 MAN1C1Q9NR34 630 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.7□□□□□ -0.38
CAPN9-203ENST00000366666 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.7□□□□□ -0.38
CAPN9-203ENST00000366666 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.7□□□□□ -0.38
CAPN9-203ENST00000366666 STAP1Q9ULZ2 295 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 HCFC2Q9Y5Z7 792 aa12.7□□□□□ -0.38
CAPN9-203ENST00000366666 C2orf16Q68DN1 1984 aa12.69□□□□□ -0.38
CAPN9-203ENST00000366666 LRRD1A4D1F6 860 aa12.69□□□□□ -0.38
CAPN9-203ENST00000366666 PRPSAP2O60256 369 aa12.69□□□□□ -0.38
CAPN9-203ENST00000366666 LRRC38Q5VT99 294 aa12.69□□□□□ -0.38
CAPN9-203ENST00000366666 SPATS2Q86XZ4 545 aaKnown RBP12.69□□□□□ -0.38
CAPN9-203ENST00000366666 CCDC50Q8IVM0 306 aa12.69□□□□□ -0.38
CAPN9-203ENST00000366666 IFT20Q8IY31 132 aa12.69□□□□□ -0.38
CAPN9-203ENST00000366666 HDAC7Q8WUI4 952 aa12.69□□□□□ -0.38
CAPN9-203ENST00000366666 PBKQ96KB5 322 aa12.69□□□□□ -0.38
CAPN9-203ENST00000366666 SLITRK1Q96PX8 696 aa12.69□□□□□ -0.38
CAPN9-203ENST00000366666 LRRC3Q9BY71 257 aa12.69□□□□□ -0.38
CAPN9-203ENST00000366666 IL21Q9HBE4 155 aa12.69□□□□□ -0.38
CAPN9-203ENST00000366666 TLR8Q9NR97 1041 aaKnown RBP12.69□□□□□ -0.38
CAPN9-203ENST00000366666 SNX10Q9Y5X0 201 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms