RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 ZNF132P52740 706 aa20.28■□□□□ 0.84
TRIM58-201ENST00000366481 EIF3EP60228 445 aaKnown RBP20.28■□□□□ 0.84
TRIM58-201ENST00000366481 FBXL19Q6PCT2 694 aa20.28■□□□□ 0.84
TRIM58-201ENST00000366481 AAGABQ6PD74 315 aa20.28■□□□□ 0.84
TRIM58-201ENST00000366481 TSHZ1Q6ZSZ6 1077 aa20.28■□□□□ 0.84
TRIM58-201ENST00000366481 SPATA18Q8TC71 538 aa20.28■□□□□ 0.84
TRIM58-201ENST00000366481 HSPBAP1Q96EW2 488 aa20.28■□□□□ 0.84
TRIM58-201ENST00000366481 MINDY3Q9H8M7 445 aa20.28■□□□□ 0.84
TRIM58-201ENST00000366481 DNAJB4Q9UDY4 337 aa20.28■□□□□ 0.84
TRIM58-201ENST00000366481 DRG1Q9Y295 367 aaKnown RBP20.28■□□□□ 0.84
TRIM58-201ENST00000366481 DNAJC16Q9Y2G8 782 aa20.28■□□□□ 0.84
TRIM58-201ENST00000366481 HEY1Q9Y5J3 304 aa20.28■□□□□ 0.84
TRIM58-201ENST00000366481 ARIH2O95376 493 aa20.27■□□□□ 0.84
TRIM58-201ENST00000366481 SNRPAP09012 282 aaKnown RBP20.27■□□□□ 0.84
TRIM58-201ENST00000366481 SRGAP2BP0DMP2 458 aa20.27■□□□□ 0.84
TRIM58-201ENST00000366481 MSX2P35548 267 aaPredicted RBP20.27■□□□□ 0.84
TRIM58-201ENST00000366481 DCTN2Q13561 401 aaKnown RBP20.27■□□□□ 0.84
TRIM58-201ENST00000366481 POLNQ7Z5Q5 900 aa20.27■□□□□ 0.84
TRIM58-201ENST00000366481 FAF2Q96CS3 445 aa20.27■□□□□ 0.84
TRIM58-201ENST00000366481 BLOC1S6Q9UL45 172 aa20.27■□□□□ 0.84
TRIM58-201ENST00000366481 SNCAIPQ9Y6H5 919 aa20.27■□□□□ 0.84
TRIM58-201ENST00000366481 FARP2O94887 1054 aaPredicted RBP20.27■□□□□ 0.84
TRIM58-201ENST00000366481 CCDC166P0CW27 439 aa20.27■□□□□ 0.84
TRIM58-201ENST00000366481 MIPP30301 263 aa20.27■□□□□ 0.84
TRIM58-201ENST00000366481 KRT81Q14533 505 aa20.27■□□□□ 0.84
TRIM58-201ENST00000366481 GJC2Q5T442 439 aaPredicted RBP20.27■□□□□ 0.84
TRIM58-201ENST00000366481 DARS2Q6PI48 645 aaKnown RBP20.27■□□□□ 0.84
TRIM58-201ENST00000366481 SDCBP2Q9H190 292 aa20.27■□□□□ 0.84
TRIM58-201ENST00000366481 TCRBV5S1A1TA0A578 114 aa20.27■□□□□ 0.83
TRIM58-201ENST00000366481 CFLARO15519 480 aa20.27■□□□□ 0.83
TRIM58-201ENST00000366481 TOP3BO95985 862 aaKnown RBP20.27■□□□□ 0.83
TRIM58-201ENST00000366481 ITGAVP06756 1048 aa20.27■□□□□ 0.83
TRIM58-201ENST00000366481 NFICP08651 508 aa20.27■□□□□ 0.83
TRIM58-201ENST00000366481 ASPAP45381 313 aa20.27■□□□□ 0.83
TRIM58-201ENST00000366481 ALDH1A3P47895 512 aa20.27■□□□□ 0.83
TRIM58-201ENST00000366481 TTC39BQ5VTQ0 682 aaPredicted RBP20.27■□□□□ 0.83
TRIM58-201ENST00000366481 CATSPERGQ6ZRH7 1159 aa20.27■□□□□ 0.83
TRIM58-201ENST00000366481 AGR3Q8TD06 166 aa20.27■□□□□ 0.83
TRIM58-201ENST00000366481 TRPM4Q8TD43 1214 aa20.27■□□□□ 0.83
TRIM58-201ENST00000366481 AK5Q9Y6K8 562 aa20.27■□□□□ 0.83
TRIM58-201ENST00000366481 NFKBIEO00221 500 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 FDFT1P37268 417 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 ITGA9Q13797 1035 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 PIGHQ14442 188 aaPredicted RBP20.26■□□□□ 0.83
TRIM58-201ENST00000366481 SLC44A4Q53GD3 710 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 DPY19L2Q6NUT2 758 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 TRIML2Q8N7C3 387 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 NLGN2Q8NFZ4 835 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 ZFP28Q8NHY6 868 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 SLC35B2Q8TB61 432 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 MRPL4Q9BYD3 311 aaKnown RBP20.26■□□□□ 0.83
TRIM58-201ENST00000366481 MAGEB5Q9BZ81 275 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 PAIP2BQ9ULR5 123 aaKnown RBP20.26■□□□□ 0.83
TRIM58-201ENST00000366481 C3orf70A6NLC5 250 aaPredicted RBP20.26■□□□□ 0.83
TRIM58-201ENST00000366481 M0QYV0 167 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 STRNO43815 780 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 COQ9O75208 318 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 SERPINA6P08185 405 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 KDELR1P24390 212 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 SERPINB8P50452 374 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 TBL3Q12788 808 aaKnown RBP20.26■□□□□ 0.83
TRIM58-201ENST00000366481 TLR1Q15399 786 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 FAM102AQ5T9C2 384 aaPredicted RBP20.26■□□□□ 0.83
TRIM58-201ENST00000366481 C16orf46Q6P387 395 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 RNF111Q6ZNA4 994 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 SLC26A11Q86WA9 606 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 MZB1Q8WU39 189 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 XAB2Q9HCS7 855 aaKnown RBP20.26■□□□□ 0.83
TRIM58-201ENST00000366481 NRBP2Q9NSY0 501 aa20.26■□□□□ 0.83
TRIM58-201ENST00000366481 PIH1D1Q9NWS0 290 aaKnown RBP20.26■□□□□ 0.83
TRIM58-201ENST00000366481 HBS1LQ9Y450 684 aaKnown RBP20.26■□□□□ 0.83
TRIM58-201ENST00000366481 NFASCO94856 1347 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 VILLO15195 856 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 HMGB2P26583 209 aaKnown RBP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 SLC25A11Q02978 314 aaKnown RBP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 CCNIQ14094 377 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 XRRA1Q6P2D8 792 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 SLC44A1Q8WWI5 657 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 ACO2Q99798 780 aaKnown RBP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 CCDC106Q9BWC9 280 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 USP29Q9HBJ7 922 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 AS3MTQ9HBK9 375 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 GINS2Q9Y248 185 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 H7C0C1 242 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 XPO1O14980 1071 aaKnown RBP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 ITGB3P05106 788 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 HOXC6P09630 235 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 ATP5OP48047 213 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 CDH6P55285 790 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 CBX3Q13185 183 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 TMC7Q7Z402 723 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 C12orf29Q8N999 325 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 GGA3Q9NZ52 723 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 ZC3H7BQ9UGR2 993 aaKnown RBP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 POMPQ9Y244 141 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 PLLPQ9Y342 182 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 E2F8A0AVK6 867 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 NOP56O00567 594 aaKnown RBP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 ZNF189O75820 626 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms