RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 NOMO2Q5JPE7 1267 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 DCDC2Q9UHG0 476 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 FBXL21Q9UKT6 434 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 CYP3A7-CYP3A51PA0A087WV96 503 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 CYP3A7P24462 503 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 SGCGQ13326 291 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 UGCGQ16739 394 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 NBPF20Q3BBV1 942 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 C16orf89Q6UX73 402 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 MFSD7Q6UXD7 560 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 WDR48Q8TAF3 677 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 RBAK-RBAKDNI3L0D1 243 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 FGFR1P11362 822 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 DMC1Q14565 340 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 DNAL1Q4LDG9 190 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 HTR3CQ8WXA8 447 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 LNPEPQ9UIQ6 1025 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 KPNA3O00505 521 aaPredicted RBP19.09■□□□□ 0.65
CLIP2-202ENST00000361545 CAND2O75155 1236 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 CSGALNACT1Q8TDX6 532 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 DTNAQ9Y4J8 743 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 TRPC5OSA6NMA1 111 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 BTBD19C9JJ37 291 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 PEX10O60683 326 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 GTF2BQ00403 316 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 CDC16Q13042 620 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 CLEC4FQ8N1N0 589 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 VCPIP1Q96JH7 1222 aa19.09■□□□□ 0.65
CLIP2-202ENST00000361545 COPS7BQ9H9Q2 264 aaPredicted RBP19.09■□□□□ 0.65
CLIP2-202ENST00000361545 ERI2A8K979 691 aaKnown RBP19.08■□□□□ 0.65
CLIP2-202ENST00000361545 PAPD7Q5XG87 772 aaKnown RBP19.08■□□□□ 0.65
CLIP2-202ENST00000361545 HES6Q96HZ4 224 aa19.08■□□□□ 0.65
CLIP2-202ENST00000361545 SEC16BQ96JE7 1060 aa19.08■□□□□ 0.65
CLIP2-202ENST00000361545 KCNK16Q96T55 309 aa19.08■□□□□ 0.65
CLIP2-202ENST00000361545 FUCA2Q9BTY2 467 aa19.08■□□□□ 0.65
CLIP2-202ENST00000361545 GID8Q9NWU2 228 aa19.08■□□□□ 0.65
CLIP2-202ENST00000361545 MSRAQ9UJ68 235 aa19.08■□□□□ 0.65
CLIP2-202ENST00000361545 PJA2O43164 708 aa19.08■□□□□ 0.65
CLIP2-202ENST00000361545 PRLRP16471 622 aa19.08■□□□□ 0.65
CLIP2-202ENST00000361545 FNDC3BQ53EP0 1204 aaKnown RBP19.08■□□□□ 0.65
CLIP2-202ENST00000361545 BTNL9Q6UXG8 535 aa19.08■□□□□ 0.65
CLIP2-202ENST00000361545 ACO2Q99798 780 aaKnown RBP19.08■□□□□ 0.65
CLIP2-202ENST00000361545 ADNPQ9H2P0 1102 aa19.08■□□□□ 0.65
CLIP2-202ENST00000361545 ACOT9Q9Y305 439 aa19.08■□□□□ 0.65
CLIP2-202ENST00000361545 PYGMP11217 842 aa19.08■□□□□ 0.64
CLIP2-202ENST00000361545 HLA-DPA1P20036 260 aa19.08■□□□□ 0.64
CLIP2-202ENST00000361545 SF3B1O75533 1304 aaKnown RBP eCLIP19.08■□□□□ 0.645e-6■■■■■ 114.9
CLIP2-202ENST00000361545 PDZK1P1A8MUH7 402 aa19.08■□□□□ 0.64
CLIP2-202ENST00000361545 RARGP13631 454 aa19.08■□□□□ 0.64
CLIP2-202ENST00000361545 NME5P56597 212 aa19.08■□□□□ 0.64
CLIP2-202ENST00000361545 TRMT11Q7Z4G4 463 aaKnown RBP19.08■□□□□ 0.64
CLIP2-202ENST00000361545 EIF3LQ9Y262 564 aaKnown RBP19.08■□□□□ 0.64
CLIP2-202ENST00000361545 F8VP50 259 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 ZNF333Q96JL9 665 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 CACNA2D2Q9NY47 1150 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 ATP5C1P36542 298 aaKnown RBP19.07■□□□□ 0.64
CLIP2-202ENST00000361545 ABCC13Q9NSE7 274 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
CLIP2-202ENST00000361545 MSH3P20585 1137 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 SP100P23497 879 aaPredicted RBP19.07■□□□□ 0.64
CLIP2-202ENST00000361545 CDH17Q12864 832 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 TP53BP2Q13625 1128 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 CACHD1Q5VU97 1274 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 PARP9Q8IXQ6 854 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 FIBCD1Q8N539 461 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 CORO1BQ9BR76 489 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 THUMPD3Q9BV44 507 aaKnown RBP19.07■□□□□ 0.64
CLIP2-202ENST00000361545 DCLK3Q9C098 648 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 DYRK1BQ9Y463 629 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 RIPK3Q9Y572 518 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 SLC44A2Q8IWA5 706 aaPredicted RBP19.07■□□□□ 0.64
CLIP2-202ENST00000361545 SYTL2Q9HCH5 934 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 NT5C1B-RDH14C9J2C7 533 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 AP5Z1O43299 807 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 ITGB3BPQ13352 177 aaPredicted RBP19.07■□□□□ 0.64
CLIP2-202ENST00000361545 FLOT2Q14254 428 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 CYTH1Q15438 398 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 C15orf59Q2T9L4 293 aaPredicted RBP19.07■□□□□ 0.64
CLIP2-202ENST00000361545 FUT11Q495W5 492 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 SLC26A11Q86WA9 606 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 PCDH9Q9HC56 1237 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 SPG21Q9NZD8 308 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 SLC27A5Q9Y2P5 690 aa19.07■□□□□ 0.64
CLIP2-202ENST00000361545 RNF103O00237 685 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 ACOX1Q15067 660 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 PABPC1LQ4VXU2 614 aaKnown RBP19.06■□□□□ 0.64
CLIP2-202ENST00000361545 LLGL2Q6P1M3 1020 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 C11orf74Q86VG3 221 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 C3orf20Q8ND61 904 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 ZNF556Q9HAH1 456 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 NMRK1Q9NWW6 199 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 TBC1D3BA6NDS4 549 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 ADCY6O43306 1168 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 IGSF6O95976 241 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 HALP42357 657 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 CES3Q6UWW8 571 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 MAGEB10Q96LZ2 347 aaPredicted RBP19.06■□□□□ 0.64
CLIP2-202ENST00000361545 ECSITQ9BQ95 431 aa19.06■□□□□ 0.64
CLIP2-202ENST00000361545 DMGDHQ9UI17 866 aaKnown RBP19.06■□□□□ 0.64
CLIP2-202ENST00000361545 ARHGAP26Q9UNA1 814 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms